Pairwise Alignments

Query, 304 a.a., NosF ATPase from Sinorhizobium meliloti 1021

Subject, 929 a.a., Ribosome-associated ATPase RbbA from Sphingobium sp. HT1-2

 Score =  129 bits (325), Expect = 2e-34
 Identities = 83/220 (37%), Positives = 121/220 (55%), Gaps = 7/220 (3%)

Query: 5   VEIAGVSKCYGDSTVVRDISFGLGAAETVALVGHNGAGKTTLIKLMLGLIRPTKGLVRVL 64
           +E   +++ +GD   V  +SF +G  E    +G NG GKTT +K++ GL+  T G   + 
Sbjct: 277 IEAHDLTRRFGDFVAVDHVSFRIGRGEIFGFLGSNGCGKTTTMKMLTGLLDATDGTASLF 336

Query: 65  GENPATGDFAVRQRLGYLPESVSFNMALTGRETLRFYARLKQVDGAATGDLFERVGLAQ- 123
           G   A GD   R R+GY+ ++ S    L+ R+ L  +ARL +V     G+L     LAQ 
Sbjct: 337 GRPIAPGDMETRMRVGYMSQAFSLYEELSVRQNLVLHARLYRVPRQQAGELVS-AALAQF 395

Query: 124 --EA-VDRPVRTYSKGMRQRLGLAQALLGMPRILLLDEPTSGLDPALRRNFY-ELITELR 179
             EA  D        G+RQRL LA A L  P IL+LDEPTSG+DPA R  F+  LI   R
Sbjct: 396 ELEAHADAVPAALPLGIRQRLQLAAACLHRPEILILDEPTSGVDPAARDMFWRHLIRLSR 455

Query: 180 AKGTTVLLSSHALTELEGRADRVIIVNKGVKIADGTLEQL 219
            +G T+ +S+H + E E R DR+ ++++G  +  G   +L
Sbjct: 456 DEGVTIFVSTHFMNEAE-RCDRISLMHRGRVLTVGAPTEL 494



 Score =  108 bits (271), Expect = 4e-28
 Identities = 86/264 (32%), Positives = 133/264 (50%), Gaps = 26/264 (9%)

Query: 5   VEIAGVSKCYGDSTVVRDISFGLGAAETVALVGHNGAGKTTLIKLMLGLIRPTKGLVRVL 64
           + I  +S  YG    + ++S  L   +T ALVG +G GK+TL+ L+ G+ +   G + VL
Sbjct: 13  IRIESLSHRYGGIIALNEVSLSLPKGKTTALVGPDGVGKSTLLGLISGVKKLQTGRLSVL 72

Query: 65  G----ENPATGDFAVRQRLGYLPESVSFNM--ALTGRETLRFYARLKQVDG----AATGD 114
           G    E     +F    R+ Y+P+ +  N+   L+ RE + F+ RL  +      A    
Sbjct: 73  GFDLTERRKREEFL--SRVAYMPQGLGRNLYPTLSVRENIDFFGRLFGLSAVEREAHMRR 130

Query: 115 LFERVGLAQEAVDRPVRTYSKGMRQRLGLAQALLGMPRILLLDEPTSGLDPALRRNFYEL 174
           L +  GLA    DRP    S GM+Q+LGL  +L+  P +L+LDEPT+G+DP  RR F+EL
Sbjct: 131 LLDATGLAPFP-DRPAGKLSGGMKQKLGLCCSLVHDPDLLILDEPTTGVDPLSRRQFWEL 189

Query: 175 ITELRAK--GTTVLLSSHALTELEGRADRVIIVNKGVKIADGTLEQLRRIA--------- 223
           +  + A+    TVL+S+  + E E R   ++ ++ G  IA G   ++ R A         
Sbjct: 190 VDAMCAERPDMTVLVSTAYMEEAE-RFGHLVAMDDGKVIAQGDTREIMRDAGADTLEAAY 248

Query: 224 -RLPTRISLKLSQAGATPAWLNGG 246
            RL  +       A   PAW + G
Sbjct: 249 VRLLPQDKRPSGDALVVPAWQDKG 272