Pairwise Alignments

Query, 399 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 354 a.a., HlyD family secretion protein from Agrobacterium fabrum C58

 Score = 73.6 bits (179), Expect = 9e-18
 Identities = 68/250 (27%), Positives = 119/250 (47%), Gaps = 21/250 (8%)

Query: 67  GQLQRITAEVGDVVKAGETQLAQIEPAPPAFLDVRTEAELQAAVEAARAAHNLAA----- 121
           G+LQ I    GD VKAG+  LAQ++ A       + EA+L+ A  A   AH+L A     
Sbjct: 55  GRLQDIMVREGDFVKAGQV-LAQMDTAQLEAKKRQAEAQLRRAKIAIDTAHSLVAQREAE 113

Query: 122 -----AELNKAKADLTFAEGERARARQLIERRTISQRTLEDAERSYHVAQANLATAEAAL 176
                A + + KA L  A    AR+RQL+    +SQ+ ++D+E +   A+A LA+A+A+L
Sbjct: 114 KTSALAVVEQRKAQLDSASKTYARSRQLLTGNAVSQQIVDDSEATEQSARATLASAQASL 173

Query: 177 KVREHELHQARSRLL--------SRQEIRSLREDCECMPVTAPVSGVVLQVMRRSEGVVE 228
              +  ++ A+++++        ++ +I S+  D     + +P  G V   + +   V+ 
Sbjct: 174 AASDAAINAAKAQIIDAEAAVDAAQADIESIETDIVDATLKSPRDGRVQYRIAQPGEVLS 233

Query: 229 AGTPLLDIGDPTDLEIVVNFLSEDAVRIRPGQ--RAIITDWGGEDLNAVVRRIEPFGQTQ 286
           AG  +L++ D  D+ +     + +A R   G   R I+       + A V  +    Q  
Sbjct: 234 AGGRVLNLVDLGDVYMTFFLPTAEAGRTSMGSDVRLILDAAPQYTIPAKVSFVADVAQFT 293

Query: 287 VSALGIEEQR 296
              +  EE+R
Sbjct: 294 PKTVETEEER 303