Pairwise Alignments

Query, 224 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 143 a.a., CBS domain protein from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 62.8 bits (151), Expect = 3e-15
 Identities = 44/132 (33%), Positives = 72/132 (54%), Gaps = 18/132 (13%)

Query: 4   RDIMKKRVLSISPDHSVSHAARAMLENQISGLPVCDDRGRLVGMLSEGDLLRRAELGLVS 63
           +D+M + V ++ P  SV  AA+AM E  +  LPVCD + R++GM+++ D++         
Sbjct: 5   KDVMTRGVRTLGPQDSVVLAAQAMEELDVGSLPVCDGQ-RILGMVTDRDIV--------- 54

Query: 64  RRDIAGVRAKPEAFIKGHSWRVGDVMTQPVVTVDEDMPVGRVAELMAAKGIKRIPVM-RA 122
                 VR   +  + G + R+ DVM+  V  V ED  +  VA  M    I+R+PV+ R 
Sbjct: 55  ------VRGVAQDLVPGQT-RLEDVMSAEVEWVFEDEGLAEVAAKMQQLQIRRLPVLDRD 107

Query: 123 EEMVGIISRSDI 134
           + +VGI+S  D+
Sbjct: 108 KRLVGILSLGDL 119



 Score = 39.3 bits (90), Expect = 4e-08
 Identities = 22/55 (40%), Positives = 30/55 (54%)

Query: 5   DIMKKRVLSISPDHSVSHAARAMLENQISGLPVCDDRGRLVGMLSEGDLLRRAEL 59
           D+M   V  +  D  ++  A  M + QI  LPV D   RLVG+LS GDL  R ++
Sbjct: 71  DVMSAEVEWVFEDEGLAEVAAKMQQLQIRRLPVLDRDKRLVGILSLGDLAARGDV 125



 Score = 27.7 bits (60), Expect = 1e-04
 Identities = 15/52 (28%), Positives = 28/52 (53%)

Query: 84  RVGDVMTQPVVTVDEDMPVGRVAELMAAKGIKRIPVMRAEEMVGIISRSDIL 135
           +V DVMT+ V T+     V   A+ M    +  +PV   + ++G+++  DI+
Sbjct: 3   QVKDVMTRGVRTLGPQDSVVLAAQAMEELDVGSLPVCDGQRILGMVTDRDIV 54