Pairwise Alignments

Query, 245 a.a., TRm23b IS ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 247 a.a., transposase from Sinorhizobium meliloti 1021

 Score = 92.8 bits (229), Expect = 6e-24
 Identities = 68/231 (29%), Positives = 105/231 (45%), Gaps = 7/231 (3%)

Query: 4   HPTLDK------LNAMGLAGMAKAFSELVANGESEHLSHAEWLGLLLEREWSSRYDRKLA 57
           H T+D+      LN + L  +   + +     + E    A +L  + E E + R  R++ 
Sbjct: 5   HNTIDEARLGIMLNELRLPTIKTLWPQFAEQADREGWPAARFLSAIAEHELAERAHRRIE 64

Query: 58  ARLRFAKLRHQATPEDVDYRAERGLDRALFMKLLGGD-WINAHDNLAICGPSGVGKSWLA 116
             L  A L    T E   + A   + +A  M +  GD W+    ++ + GP G GKS LA
Sbjct: 65  RHLAEAHLPPGKTLESFAFDAVPMVSKAQVMAIAAGDSWLAKGASILLFGPPGGGKSHLA 124

Query: 117 CALGHKACRDDRSVLYQRVPRLFAQLALARGDGRYARLQRTLGHVQLLILDDWGLEPLNE 176
            A+G     +   VL+ R   L  +L +AR + +       L    LLILDD      ++
Sbjct: 125 AAIGLALIENGWRVLFTRTTDLVQKLQVARRELQLESAIAKLDKFDLLILDDLAYVTKDQ 184

Query: 177 QARHDLLEILEDRYGRKSTIITSQLPVSAWHGVIGDPTYADAILDRLVHNA 227
                L E++  RY R+S +IT+  P   W+ V  DP    A +DRLVH+A
Sbjct: 185 AETSVLFELISARYERRSIMITANQPFGEWNRVFPDPAMTLAAVDRLVHHA 235