Pairwise Alignments

Query, 276 a.a., TRm1b transposase from Sinorhizobium meliloti 1021

Subject, 301 a.a., CP4-44 prophage; IS2 insertion element transposase InsAB' (NCBI) from Escherichia coli BW25113

 Score =  265 bits (676), Expect = 1e-75
 Identities = 137/273 (50%), Positives = 178/273 (65%), Gaps = 2/273 (0%)

Query: 3   SVCETLGVARSNIAARAAGSPSRARGRPPLPDRELVEDIKAVIADMPTYGYRRVHAILRR 62
           S C  +  A+ ++  R        R      D +++  I  VI ++PTYGYRRV A+LRR
Sbjct: 18  SRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVIGELPTYGYRRVWALLRR 77

Query: 63  NARKLGRSWPNAKRVYRVMKLHNLLLVRHTGAVDN-RLHEGQVAVERSNIRWCSDGFEIG 121
            A   G    NAKRVYR+M+ + LLL R      + R H G+VAV+ SN RWCSDGFE  
Sbjct: 78  QAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFC 137

Query: 122 CDNKEKVRVAFALDCCDREAIAHVATTEGIKSQDVQDLVITAVENRFGRINMLSEPIEWL 181
           CDN E++RV FALDCCDREA+    TT G  S+ VQD+++ AVE RFG  ++ S P+EWL
Sbjct: 138 CDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAVERRFGN-DLPSSPVEWL 196

Query: 182 TDNGSCFIAKDTASLLRDIGMEPCTTPVRSPQSNGMAEAFVKTFKRDYVAVNPTPDAETV 241
           TDNGSC+ A +T    R +G+EP  T VRSP+SNG+AE+FVKT KRDY+++ P PD  T 
Sbjct: 197 TDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTA 256

Query: 242 MAQLPFWFEHYNNLHPHSALGYQSPREFISSQS 274
              L   FEHYN  HPHSALGY+SPRE++  ++
Sbjct: 257 AKNLAEAFEHYNEWHPHSALGYRSPREYLRQRA 289