Pairwise Alignments

Query, 410 a.a., TRm5 transposase from Sinorhizobium meliloti 1021

Subject, 402 a.a., IS256 family transposase from Erwinia tracheiphila SCR3

 Score =  138 bits (347), Expect = 3e-37
 Identities = 88/334 (26%), Positives = 160/334 (47%), Gaps = 1/334 (0%)

Query: 25  REVIRTVMQEVLEAEMDEALGAAKGERTPERLGYRSGHYGRTLITRVGKLELRVPQDRSG 84
           R + +  ++    AE+ + LG  K          R+G+  +TL+   G++ L  P+DR  
Sbjct: 28  RMLTKLTVETARNAELTDHLGHEKNA-PKTGTNTRNGYSSKTLLCDDGEIGLNTPRDREN 86

Query: 85  HFSTELFERYQRSERALVATLAEMYVQGVSTRKVKAITEELCGHAFSASSISAINKRLDE 144
            F  +L ++ Q     + + +  +Y +G++TR++    +E+     S + IS +   + E
Sbjct: 87  TFEPQLIKKNQTRIAQMDSQILSLYAKGMTTREIVDTFKEMYDADVSPALISKVTDAVKE 146

Query: 145 SLKAFAERSLEEPFAYLILDARYEKVREAGVVMSQAVLIAVGIDWDGRRQILSVEMAGRE 204
            +  +  R L+  +  + +D    KVR+ G V+++AV +A GI+ +GR+++  + +A  E
Sbjct: 147 QVAEWQNRQLDALYPIVYMDCIVVKVRQNGSVINKAVFLAPGINTEGRKELPGMWLAENE 206

Query: 205 SRSAWKDFLVRLKGRGLKGVELVVSDDHAGLVAAIGEVIPEAAWQRCYVHFLRNALDHLP 264
               W + L  LK RGL+ + +   D   G   AI  V  +   Q C +H +RN L ++ 
Sbjct: 207 GAKFWLNVLTELKNRGLQDILIACVDGLKGFPDAINSVYLQTHIQLCIIHIVRNRLKYVA 266

Query: 265 RKHGDDCLQELRWLYDRRDLDEAKADLAAWLGKWSVRYPRLTSWVEETIEQTLTFFRLPR 324
            K        L+ +Y       A+  LAA+  +W  +YP+++       E   TFF  P 
Sbjct: 267 WKDYKAVTGGLKTVYQAPTEAAARMALAAFAEEWDDKYPQISKSWRAHGENLNTFFGYPS 326

Query: 325 QHHKHLKSTNMLERLNEEIRRRTYVVRIFPNTES 358
              K + +TN +E LN  IR      ++FP  +S
Sbjct: 327 DIRKAIYTTNAIESLNSVIRAAIKKRKVFPTDDS 360