Pairwise Alignments

Query, 333 a.a., TRm24 transposase from Sinorhizobium meliloti 1021

Subject, 282 a.a., Transposase and inactivated derivatives, IS30 family from Variovorax sp. SCN45

 Score =  144 bits (364), Expect = 2e-39
 Identities = 97/257 (37%), Positives = 136/257 (52%), Gaps = 26/257 (10%)

Query: 97  WSPEQIAGRLLAD--GVSAVRVCTETIYRFIYSKEDYAL--ELYQHLPEGRRKRRPR-RS 151
           WSPEQIA RL  D     ++R+  E IY+ +Y +   AL  EL  +L  GR  R PR R+
Sbjct: 18  WSPEQIANRLQVDFPDDQSMRISHEAIYQALYIQGRGALKRELVSYLRMGRALRVPRARA 77

Query: 152 RKPRDGSIPLDCRISQRPDFIADRSQFGHWEGDLLIFRRDLGEANVTSLVERKSRYTVMI 211
           +      +  +  IS RP    DR+  GHWEGDL+I    L  + + +LVER SR+T+++
Sbjct: 78  QATAWAHVSEEVMISSRPAEAEDRAVPGHWEGDLII---GLDRSAIGTLVERSSRFTMLV 134

Query: 212 --------------KNGSRHSR----PLIDKIIDAFSPLPAFARQSFTFDRGTEFRGFKA 253
                         KNG   S      + + +    + LPA   QS T+DRG E      
Sbjct: 135 HLPREAGYRLTPRTKNGPALSGYGAVTMANALKRTVATLPAELWQSLTWDRGKELSDHAR 194

Query: 254 LEDGLGARSWFCDPNSPWQKGAVENTNKRIRRFVPSDTDLSAVSQPQLVALAHHLNSLPR 313
                G R +F DP SPWQ+G  ENTN  +R++ P  TDLS  S+ ++ A+A  LN+ PR
Sbjct: 195 FSIESGVRVFFADPRSPWQRGTNENTNGLLRQYFPKGTDLSRWSEQEIQAVARTLNNRPR 254

Query: 314 KCLGYRTPAEVFMAHLR 330
           K LG++TPAE    +L+
Sbjct: 255 KTLGWKTPAETLNQYLK 271