Pairwise Alignments

Query, 333 a.a., TRm24 transposase from Sinorhizobium meliloti 1021

Subject, 333 a.a., Mobile element protein from Sphingobium sp. HT1-2

 Score =  311 bits (796), Expect = 2e-89
 Identities = 164/320 (51%), Positives = 209/320 (65%), Gaps = 1/320 (0%)

Query: 5   YLQLTLPDRRRVHQLLERKVPIAEIARQLGRHRSTIYRELKRNTFHDAEFPEYSGYYSGI 64
           Y  L L +RR ++QL+     + +IA  LGRH +TIYRELKRN   D E P + GY+   
Sbjct: 4   YQHLGLDERRDIYQLMATGQSVRQIADALGRHPATIYRELKRNRHLD-EHPLFRGYFPTA 62

Query: 65  ANDISKERRRRLRKLSRHPQLRELVIEQLKALWSPEQIAGRLLADGVSAVRVCTETIYRF 124
           A  ++  RR R  K++R P+L   +  +L A WSPEQIAG L         VC ETIY++
Sbjct: 63  AQTMANGRRVRGGKIARRPELAAYIANRLSAAWSPEQIAGYLRRHRGIRETVCHETIYQY 122

Query: 125 IYSKEDYALELYQHLPEGRRKRRPRRSRKPRDGSIPLDCRISQRPDFIADRSQFGHWEGD 184
           +Y  E    +L++HLP  RR RR R  RKPR   IP+   I  RP  IADRS FGHWEGD
Sbjct: 123 VYGPEGRHQKLWRHLPVARRSRRQRYGRKPRGLHIPVTNTIGARPQEIADRSSFGHWEGD 182

Query: 185 LLIFRRDLGEANVTSLVERKSRYTVMIKNGSRHSRPLIDKIIDAFSPLPAFARQSFTFDR 244
           LLIF+R+ G+AN+TSLVER+SR+T + +N SRHS  ++  I      LP   R+S TFDR
Sbjct: 183 LLIFKREYGKANLTSLVERRSRFTFLARNPSRHSAGVMAGIDRHLHALPPSLRRSITFDR 242

Query: 245 GTEFRGFKALEDGLGARSWFCDPNSPWQKGAVENTNKRIRRFVPSDTDLSAVSQPQLVAL 304
           GTEF  F  L + LG  S+FC P++PWQKG VEN N RIRRF+PS TDL+ +S+ ++ A+
Sbjct: 243 GTEFAAFATLRNRLGITSYFCLPSAPWQKGGVENCNGRIRRFLPSHTDLALLSEKEIQAV 302

Query: 305 AHHLNSLPRKCLGYRTPAEV 324
           A  LNS PRKCLGYRTP EV
Sbjct: 303 ADRLNSTPRKCLGYRTPHEV 322