Pairwise Alignments

Query, 230 a.a., GntR family transcriptional regulator from Sinorhizobium meliloti 1021

Subject, 240 a.a., Transcriptional regulator of deoxyribose catabolism (from data) from Pseudomonas simiae WCS417

 Score =  120 bits (300), Expect = 3e-32
 Identities = 72/222 (32%), Positives = 116/222 (52%), Gaps = 1/222 (0%)

Query: 1   MADNSKESPDLERAP-ERLGDAAYREMKERIIRGVYRPGHKLTVRAIAQDLEVSTTPARD 59
           M D     P L +   + L D  YR+++E ++ G ++PG KLT+R +A+ L  S  P R+
Sbjct: 1   MTDGPLLLPTLRQVSRDTLQDQVYRQIREALMSGRFQPGQKLTIRGLAEALGSSPMPVRE 60

Query: 60  AINRLTSEGALFYAGPKTVVVPVLDASALREITLTRLALEGLASEQAAQHGTPAEVEKLK 119
           A+ RL++E A        + V ++    LREI   R+ALEGL +E+A      A+++++ 
Sbjct: 61  ALQRLSAENAFEVTETSRLRVRLMTVERLREIRDARVALEGLLAEKAVLLLQKADLDEIT 120

Query: 120 SLQKLINSALDEKRYAEALWHNKEFHFTVYRLAGLPQLVSMIESLWLRIGPSLHNLYPEF 179
            L + +  A DE   +  LW N  FH  +Y +A     ++ +E+ WL +GP    + P+ 
Sbjct: 121 DLCQQMQHAADEVDVSRYLWTNFAFHRRIYAVAQAELTMAAVENFWLHMGPCFALVAPDK 180

Query: 180 AEEKYGVRNHEIAMEALAERDAASLRAAMENDIRDGYRRLKR 221
           A  +  +  H   +EALA RD    RAA+ +DI      L R
Sbjct: 181 AHLQRSMEAHTRIVEALAARDGGGARAAVTDDIMQAADSLAR 222