Pairwise Alignments

Query, 296 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 285 a.a., Spermidine/putrescine transport system permease protein PotB from Azospirillum sp. SherDot2

 Score =  194 bits (492), Expect = 3e-54
 Identities = 116/272 (42%), Positives = 165/272 (60%), Gaps = 12/272 (4%)

Query: 29  MALVTPLLAAMLAGFLYPVARLIALSFS----GGTF--SHYRRIFTEPLHLEVLFSTIEV 82
           + L  PL A  +  F+ P+  L+ALSF     GG +  + Y     +   L VL ST+ +
Sbjct: 13  LKLAAPLAAGFVLFFVTPLVILLALSFQTDPQGGHYGLTQYVAFLGDSFSLGVLGSTLWL 72

Query: 83  AFVVTVAGLLLGFPVAYLMARL---SRGLAMAVAACVFVPLWTSVLIRSYAWVVLLQRNG 139
              VTV  LLLG+PVA+L  R    +RG+ M +   V +PL TSV++R++AWVV+L R G
Sbjct: 73  GVKVTVLTLLLGYPVAWLHQRSPGWARGIIMLL---VLLPLLTSVVVRTFAWVVILGRQG 129

Query: 140 IVNKLLADTGVTEGPLKLIYTQGAVILAMTHVLMPFMILPIYSALRALPPDYVRAARNLG 199
           IVN  L+  G+ + PLKL+YT+G V++A+  V MP M+LPI +AL  + P++  A+  LG
Sbjct: 130 IVNATLSWIGLIDTPLKLLYTEGGVVVALAQVQMPLMVLPIITALSRIDPNFADASSVLG 189

Query: 200 AGPIRAFVTVTLPLSLPGIFAGSVMCFVLALGFYITPALVGGPSSMLMATLIGQQTTVLL 259
           AG  R F  V LPLSLPGI AG ++ +  A+  +IT +L+GG   + M   I QQ + L 
Sbjct: 190 AGHWRTFRKVILPLSLPGIVAGCLLTYAAAITAFITQSLIGGGQMLFMPMYIYQQASTLQ 249

Query: 260 DWPFAAALSTVLLAVTLLFVLMFRRTLSLSKG 291
           +WPFAAA+S V L   L+ V +F     LS+G
Sbjct: 250 NWPFAAAISIVFLLSVLVVVSIFNALGRLSRG 281