Pairwise Alignments

Query, 287 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 271 a.a., Inner membrane ABC transporter permease protein YdcV from Xanthobacter sp. DMC5

 Score =  131 bits (329), Expect = 2e-35
 Identities = 71/243 (29%), Positives = 131/243 (53%), Gaps = 2/243 (0%)

Query: 46  FLLLPTLIVLPMSLSETDYIEFPPQGLTLKWYSAYFNDPDWMTATWFSLKIALATTATAT 105
           FL +P ++++  S + +  +     G + +WY +   +   + A W +L+IA  ++  AT
Sbjct: 19  FLYIPIILLVIYSFNASRLVTVWA-GFSTQWYWSLLENEQLIDAAWVTLRIAFFSSLVAT 77

Query: 106 VVGTMAALAIVR-GSLPFRSTLQALALGPMIVPHIILGVALYLSFTPLQLTGSFYGFLVA 164
           V+GTMAALA+ R G    R+    +   P+++P +I G++L L F  +     F+  L+A
Sbjct: 78  VLGTMAALALTRYGRFGGRTLFSGMIYAPLVMPEVITGLSLLLLFVAVNFDRGFWTVLLA 137

Query: 165 HTVLAVPYVIITVTASLQRFDPTLELAALNCGANRLQAFFLVVLPNIVPGVAAAAVFAFL 224
           H    + +V + V + L  FD TLE AAL+ G    Q FF + LP I+P V +  + AF 
Sbjct: 138 HITFTMCFVAVVVQSRLVTFDRTLEEAALDLGCPPFQTFFKITLPLILPAVVSGFMLAFT 197

Query: 225 ASFDEATVAFFISDIGGKSIGRKMFEDIDFNLTPVIAAVSTVLVATSLLLMGTLHLMNRK 284
            S D+  +A F +  G  ++  +++  +   +TP I AV T+L+A   +++    ++ ++
Sbjct: 198 LSLDDLVIASFTTGPGATTLPMRIYSQVRLGVTPEINAVCTILIAIVTVVVIVASIVTKR 257

Query: 285 SRS 287
           + +
Sbjct: 258 AEN 260