Pairwise Alignments

Query, 287 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 264 a.a., Inner membrane ABC transporter permease protein YdcV from Xanthobacter sp. DMC5

 Score =  164 bits (414), Expect = 3e-45
 Identities = 87/241 (36%), Positives = 134/241 (55%)

Query: 35  AIGVGIGCILFFLLLPTLIVLPMSLSETDYIEFPPQGLTLKWYSAYFNDPDWMTATWFSL 94
           A+ +  G +  FLL P L+VLP+S S  D++ FPP   ++KWY A F +   M A W SL
Sbjct: 9   ALKIAAGLMFLFLLAPLLVVLPISFSGDDFMAFPPSSWSVKWYGAIFANSVMMNAFWISL 68

Query: 95  KIALATTATATVVGTMAALAIVRGSLPFRSTLQALALGPMIVPHIILGVALYLSFTPLQL 154
            +A   TA +  +G  AA A+VR   P    L  L   P+++P I+LG+AL L F P+ L
Sbjct: 69  ALAFVVTALSLGIGLPAAYALVRLKPPGAEALSNLFSAPLLLPTIVLGLALLLVFAPMGL 128

Query: 155 TGSFYGFLVAHTVLAVPYVIITVTASLQRFDPTLELAALNCGANRLQAFFLVVLPNIVPG 214
            GSF G + AH ++ +PY +  ++ +L     T+E AA   GA  L  FF V LP +  G
Sbjct: 129 IGSFQGLVAAHLIVTLPYAVRVLSTALANLPLTVEEAAGMLGARPLTVFFRVTLPMMRSG 188

Query: 215 VAAAAVFAFLASFDEATVAFFISDIGGKSIGRKMFEDIDFNLTPVIAAVSTVLVATSLLL 274
           + +     FL SFDE  ++ F++    +++   M+  +D    P+ AA+S +LV  +L +
Sbjct: 189 LVSTTALCFLVSFDEVVLSLFMTGPRLQTLPVAMYNHVDQQADPMAAAISVLLVVLTLAV 248

Query: 275 M 275
           +
Sbjct: 249 V 249