Pairwise Alignments

Query, 287 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 264 a.a., ABC-type spermidine/putrescine transport system, permease component II from Variovorax sp. SCN45

 Score =  152 bits (383), Expect = 1e-41
 Identities = 81/233 (34%), Positives = 135/233 (57%)

Query: 43  ILFFLLLPTLIVLPMSLSETDYIEFPPQGLTLKWYSAYFNDPDWMTATWFSLKIALATTA 102
           ++ F+L P ++V  ++ +  + +  P    +L+W+ A F  PD+M + W SL +AL++  
Sbjct: 15  VIVFMLAPLVVVCIVAFTPENTLTIPTTRFSLRWFEAVFAHPDFMQSFWNSLWLALSSAT 74

Query: 103 TATVVGTMAALAIVRGSLPFRSTLQALALGPMIVPHIILGVALYLSFTPLQLTGSFYGFL 162
            AT++   A +AI R     R  L  L L P+IVPH++LGVAL   F  +  TGSF   +
Sbjct: 75  IATLLAVPAGMAITRYEFAGRDFLNGLFLSPLIVPHLVLGVALLRLFALVGGTGSFGWLV 134

Query: 163 VAHTVLAVPYVIITVTASLQRFDPTLELAALNCGANRLQAFFLVVLPNIVPGVAAAAVFA 222
           +AH ++  PY +  V A+L  FD + E AAL+ GA++   F  + LP I+PGV    + A
Sbjct: 135 MAHALIVTPYTLRLVVAALVGFDRSAEQAALSLGASQATVFRRITLPMILPGVTGGWMLA 194

Query: 223 FLASFDEATVAFFISDIGGKSIGRKMFEDIDFNLTPVIAAVSTVLVATSLLLM 275
           F+ SFDE T++ F++     ++  +M+     ++ P++AAVS ++VA +   M
Sbjct: 195 FINSFDEVTMSIFVTAPSTVTLPVRMYMYATESIDPLMAAVSALMVAVTACAM 247