Pairwise Alignments

Query, 287 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 297 a.a., spermidine/putrescine ABC transporter - permease subunit from Pseudomonas putida KT2440

 Score =  114 bits (285), Expect = 3e-30
 Identities = 72/238 (30%), Positives = 124/238 (52%), Gaps = 9/238 (3%)

Query: 44  LFFLLLPTLIVLPMSLSETDYIEFPPQGLTLKWYSAYFNDPDWMTATWFSLKIALATTAT 103
           L F+ LP LI++  S + +  +     G ++KWY    ++   M +   SL+IA  T   
Sbjct: 15  LLFIYLPMLILVIYSFNASKLVTVWG-GWSIKWYVGLLDNSQLMGSVMRSLEIACYTAVA 73

Query: 104 ATVVGTMAALAIVRGS-LPFRSTLQALALGPMIVPHIILGVALYLSFTPL-QLTG----- 156
           A  +GT+AA  + R +    R+    L   P+++P +I G++L L F  + Q+ G     
Sbjct: 74  AVALGTLAAFVLTRVTRFKGRTLFGGLVTAPLVMPEVITGLSLLLLFVAMAQMIGWPQER 133

Query: 157 SFYGFLVAHTVLAVPYVIITVTASLQRFDPTLELAALNCGANRLQAFFLVVLPNIVPGVA 216
                 +AHT     YV + V+A L+  D ++E AA++ GA   + FFL+ +P I P +A
Sbjct: 134 GIVTIWIAHTTFCAAYVAVVVSARLRELDLSIEEAAMDLGAKPWKVFFLITIPMIAPSLA 193

Query: 217 AAAVFAFLASFDEATVAFFISDIGGKSIGRKMFEDIDFNLTPVIAAV-STVLVATSLL 273
           A  + +F  S D+  +A F+S  G  ++  ++F  +   + P I AV S +L++ SL+
Sbjct: 194 AGGMMSFALSLDDLVLASFVSGPGSTTLPMEVFSAVRLGVKPEINAVASLILLSVSLV 251