Pairwise Alignments

Query, 357 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 346 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  118 bits (296), Expect = 2e-31
 Identities = 105/349 (30%), Positives = 166/349 (47%), Gaps = 27/349 (7%)

Query: 21  SLLPISL----PALGAEKVIIASTGGAYDKALREAWFDPFTKATGIEVVTVAATNSEMRA 76
           S+L +SL     A+    + + S GGA   A  +A++ P+  A   ++V     N EM A
Sbjct: 8   SVLALSLMGATQAMAGPDLTVVSFGGANKAAQVKAFYAPWESAGNGKIVA-GEYNGEM-A 65

Query: 77  KAAAMVKTGNVNWDLYLDGEIQAASKAHRKVTEDLTEFC--RQFADREDLSVNACSAGGA 134
           K  AMV T +V+WDL    E+++   + R   ED+ E    + F +  D    A    G 
Sbjct: 66  KVKAMVDTKSVSWDLV---EVESPELS-RGCDEDMFEPLDPKLFGNTADYVKGAIQPCGV 121

Query: 135 LLQSTATLLAYRTGKHGDSVPATWADMWDTRKFPGERAFPNFDDPWRVMAAALLADGVTR 194
                +T+LAY   K   S P +WAD WDT+KFPG+R           +  AL+ADGV  
Sbjct: 122 GFFVWSTVLAYNADKLA-SAPTSWADFWDTKKFPGKRGLRK--GAKYTLEFALMADGVAP 178

Query: 195 DELFPL-----DIDRALAKLDQIKPSVSLWWKTGDQSVQGFRNGEYSLGQIWLTRAKAMQ 249
            +++ +       DRA  KLD++KPS+  WW+ G Q  Q   +G+  +   +  R  A+Q
Sbjct: 179 KDVYKVLAGKDGQDRAFKKLDELKPSIQ-WWEAGAQPPQYLASGDVVMSSAYNGRIAAVQ 237

Query: 250 SE-GLPIAWSYKAAFLVGDRIALLKG-APHRDNALKLITFWLNSPAAQAKACEVLSCTPP 307
            E  L + W+        D  A+ KG A  R  A K    +   P  Q    E ++  P 
Sbjct: 238 KESNLKVVWN--GGIYDFDAWAIPKGLAKDRAEAAKKFIAFSVQPQQQKTYSENIAYGPA 295

Query: 308 SSDAIAMMSDEARKTMP-QGDDVRDYVIIPDAEWINANAAMMLQRWNEW 355
           ++ A+ +++ +  K MP   +++ + V I  + W + N   + QR+N W
Sbjct: 296 NTQAVPLLAKDVLKDMPTTPENIANQVQIDVSFWAD-NGEQLEQRFNSW 343