Pairwise Alignments

Query, 357 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 345 a.a., no description from Variovorax sp. SCN45

 Score = 57.4 bits (137), Expect = 6e-13
 Identities = 78/319 (24%), Positives = 131/319 (41%), Gaps = 31/319 (9%)

Query: 5   LSRSTTVLKTAIAGLLSLLPISLPALGAE--KVIIASTGGAYDKALREAWFDPFTKATGI 62
           +S  +T     +A     L  S PA  A   +V+IA+ GG Y   L +    P  K  GI
Sbjct: 1   MSSHSTRRSLLLAAASLPLAASAPAFAAVGGRVVIATWGGDYGDLLGKNVEQPLLKPRGI 60

Query: 63  EVVTVAATNSEMRAKAAAMVKTGNVNWDLYLDGEIQAASKAHRKVTEDLTEFCRQFADRE 122
           E V         +AK  A   +   + D+    + +A+  A   + E LT          
Sbjct: 61  EAVQSTDDGPPRKAKLLAERNSRRGSLDVVSLVDFEASGLAQMGLFETLT---------- 110

Query: 123 DLSV-NACSAGGALLQSTAT-------LLAYRTGKHGDSVPATWADMWDTRKFPGERAFP 174
           D +V NA +A  AL Q  A        ++AY   K   + P ++ D+WD  K+ G     
Sbjct: 111 DANVPNARNAIAALRQPQAVPHVYSGLVIAYNPDKI-RTPPKSFNDLWDP-KYKGRVGLA 168

Query: 175 NFDDPWRVMAAALLADGVTRDELFPLDIDRALAKLDQIKPSVSLWWKTGDQSVQGFRNGE 234
               P+ + AA+L A G T  +L P      + KL ++K      + T +   Q  ++ +
Sbjct: 169 EILFPYNIAAASLAAGG-TLSDLAP-----GMKKLGEMKALSPKIFATNEAVAQALKSED 222

Query: 235 YSLGQIWLTRAKAMQSEGLPIAWSYKAAFLVGDRIALL--KGAPHRDNALKLITFWLNSP 292
             +   W  R    +  G+ +A +  A  ++    + +  K +  +DNA   +   L++ 
Sbjct: 223 IWITLAWRARVYQWRRAGVSVAAAVPAEGIMPTTFSAVVPKNSQQKDNAFAYLDAMLDA- 281

Query: 293 AAQAKACEVLSCTPPSSDA 311
            AQA   E +   P  ++A
Sbjct: 282 RAQAAFAERMGYVPTVTNA 300