Pairwise Alignments

Query, 357 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 341 a.a., Polyamine ABC transporter, periplasmic polyamine-binding protein from Pseudomonas putida KT2440

 Score =  180 bits (456), Expect = 6e-50
 Identities = 123/353 (34%), Positives = 186/353 (52%), Gaps = 17/353 (4%)

Query: 5   LSRSTTVLKTAIAGLLSLLPISLPA-LGAEKVIIASTGGAYDKALREAWFDPFTKATGIE 63
           LS+  T + +A     SLL ++  A L A+ +   S GG    A +EAW  PFTKAT I+
Sbjct: 3   LSKRVTAVLSA-----SLLTLACQAALAADSLNFVSWGGTTQDAQKEAWAVPFTKATNIK 57

Query: 64  VVTVAATNSEMRAKAAAMVKTGNVNWDLYLDGEIQAASKAHRKVTEDLTEFCRQFADRED 123
           VV    T+     K  AMV++GNV WD+ +D E   A +A  +   +  +F +   D+ D
Sbjct: 58  VVQDGPTDY---GKLKAMVESGNVQWDV-VDVEADFALRAASEGLLEPLDFNQIKRDKID 113

Query: 124 LSVNACSAGGALLQSTATLLAYRTGKHGDSVPATWADMWDTRKFPGERAFPNFDDPWRVM 183
               +    G+   S   +L Y  GK G + P  W  ++DT+ +PG+RA   +  P  V+
Sbjct: 114 PRFVSDHGVGSFFFSF--VLGYNEGKLGANKPVDWTALFDTKAYPGKRALYKWPSPG-VL 170

Query: 184 AAALLADGVTRDELFPLDIDRALAKLDQIKPSVSLWWKTGDQSVQGFRNGEYSLGQIWLT 243
             ALLADGV  D+L+PLD+DRA  KLD IK  + +WW  G QS Q   +GE SLGQ W  
Sbjct: 171 ELALLADGVAPDKLYPLDLDRAFKKLDTIKQDI-VWWGGGAQSQQLLASGEASLGQFWNG 229

Query: 244 RAKAMQSEGLPIAWSYKAAFLVGDRIALLKGAPHRDNALKLITFWLNSPAAQAKACEVLS 303
           R  A+Q +G P+  S+K   ++ D + + KGA +++ A+K +    +S   QA+     +
Sbjct: 230 RVYALQQDGAPVGVSWKQNLVMADFLVIPKGAKNKEAAMKFLAN-ASSAEGQAEFANKTA 288

Query: 304 CTPPSSDAIAMMSDEARKTMPQGDDVRDYVIIPDAEWINANAAMMLQRWNEWI 356
             P + D++A +  +    +P     +D V +  A W   N   +  RWNEW+
Sbjct: 289 YAPVNVDSVAKLDKDLAPNLPTA-YAQDQVTLDFAYWAK-NGQAIAARWNEWL 339