Pairwise Alignments

Query, 357 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 336 a.a., polyamine ABC transporter substrate-binding protein from Agrobacterium fabrum C58

 Score =  143 bits (361), Expect = 6e-39
 Identities = 114/359 (31%), Positives = 169/359 (47%), Gaps = 37/359 (10%)

Query: 7   RSTTVLKTAIAGLLSLLPISLPALGA----EKVIIASTGGAYDKALREAWFDPFTKATGI 62
           RS  VL T  A         L ALGA      ++ +S GG    A + AW + F   TGI
Sbjct: 2   RSKLVLSTCAA---------LFALGAAAQANDLVFSSWGGTTQDAQKAAWAEKFMVETGI 52

Query: 63  EVVTVAATNSEMRAKAAAMVKTGNVNWDLYLDGEIQAASKAHRKVTEDLTEFCRQFADRE 122
            V+    T+     K  AMV+   V WD+ +D E   A++A  K   +  +F     D+ 
Sbjct: 53  NVLQDGPTDY---GKLKAMVEANGVTWDV-VDVEGDYAAQAGPKGLLEKLDF--SVIDKT 106

Query: 123 DLS---VNACSAGGALLQSTATLLAYRTGKHGDSV---PATWADMWDTRKFPGERAFPNF 176
            L    V   S G       +   ++  G + DSV   P +WAD++DT KFPG+R F  +
Sbjct: 107 KLDPRFVTDYSVG-------SFYYSFVIGCNVDSVSACPKSWADLFDTAKFPGKRTFYKW 159

Query: 177 DDPWRVMAAALLADGVTRDELFPLDIDRALAKLDQIKPSVSLWWKTGDQSVQGFRNGEYS 236
             P  V+ AALLADGVT D+L+PLD+DRA  KLD IK  + +WW  G QS Q   + E  
Sbjct: 160 SAPG-VIEAALLADGVTADKLYPLDLDRAFKKLDTIKSDI-IWWSGGAQSQQLIASAEAP 217

Query: 237 LGQIWLTRAKAMQSEGLPIAWSYKAAFLVGDRIALLKGAPHRDNALKLITFWLNSPAAQA 296
            G +W  R  A++  G+ +  S+       D + + KG  ++D A+K I     S  AQA
Sbjct: 218 FGSVWNGRMTALEQSGVKVETSWAQNITAADSLVVPKGTKNKDAAMKFIAL-ATSAQAQA 276

Query: 297 KACEVLSCTPPSSDAIAMMSDEARKTMPQGDDVRDYVIIPDAEWINANAAMMLQRWNEW 355
                    P + ++  +M  +  K++P  D   +  +  D  +   +   + +RW  W
Sbjct: 277 DMATATGYAPVNIESAKLMDPKIAKSLP--DQQTESQVNADMNYWAQHRDEIGERWYAW 333