Pairwise Alignments

Query, 639 a.a., conjugal transfer protein TraG from Sinorhizobium meliloti 1021

Subject, 677 a.a., Coupling protein VirD4, ATPase required for T-DNA transfer from Variovorax sp. SCN45

 Score = 93.6 bits (231), Expect = 3e-23
 Identities = 104/417 (24%), Positives = 176/417 (42%), Gaps = 30/417 (7%)

Query: 222 HMLFFAGSGGYKTTSNVVPTALRYTGPLICLDPSTEVAPMVVEHRTRVLGREVMVLDPTN 281
           H+L FA +   K    VVPT L +    +  D   E   +    R+R      ++ +PT+
Sbjct: 146 HVLTFAPTRSGKGVGLVVPTLLSWPASAVVHDIKGENWQITAGWRSRF--SHCLLFNPTD 203

Query: 282 P-IMGFNVLDGIEHSRQKEEDIVGIAHMLLSESVRFESSTGSYFQNQAHNLLTGLLAHVM 340
                +N L  +     +  D+  IA +L+      E    ++++  +H LL G + HV+
Sbjct: 204 AKSAAYNPLLEVRRGAHEVRDVQNIADILVDPEGALEKR--NHWEKTSHALLVGAILHVL 261

Query: 341 LSPEYAGR-RTLRSLRQIVSEP-EPSVLAMLRDIQER--------SASTFIRETLGVFTN 390
               YAG  +TLR +   +S+P  P  L + R +           S    +        N
Sbjct: 262 ----YAGEDKTLRGVANFLSDPASPFELTLHRMMTTPHLMNGNGGSPHPVVASAAREVLN 317

Query: 391 MTEQTFSGVYSTASKDTQWLSLDSYAALVCGNAFKSSDIVSGKKDVFLNI---PASILRS 447
            ++   SGV STA          + A +     ++ +D++S +  V L +   P+ I R+
Sbjct: 318 KSDNERSGVLSTAMSFLGLYRDPTVAEVTSRCDWRIADLISAEHPVSLYLVVPPSDISRT 377

Query: 448 YPGIGRVI--IGSLINAMIQADGSFKRR--ALFMLDEVDLLGYMRLLEEARDRGRKYGIS 503
            P I  ++  IG  +   +      +RR   L MLDE   LG +   E A      YGI 
Sbjct: 378 KPLIRLILNQIGRRLTESLDGSDGIERRHKLLLMLDEFPALGRLDFFETALAFMAGYGIR 437

Query: 504 MMLLYQSLGQLERHFGRDGAVSWIDGCAFASYAAVKALDTARNISAQCGEMTVEVKGSSR 563
             L+ QSL Q+++ +G++ ++  +D C      A     TA+ IS   G  T E++    
Sbjct: 438 SFLIAQSLNQIDKAYGQNHSI--LDNCHVRVTFATNDERTAKRISETLGTAT-ELRAQRN 494

Query: 564 NIGWDTKNSASRKSENVNYQRRPLIMPHEITQSMRKDEQIIIVQGHSPIRCGRAIYF 620
             G            +     RPL+ P E+ Q +  DE +++V   +PIR  +  Y+
Sbjct: 495 YAGHRLAPWLGHLMVSRQETARPLLTPGEVMQ-LPPDEAVVMVSSVAPIRAKKLRYY 550