Pairwise Alignments

Query, 1087 a.a., DnaE3 DNA polymerase III alpha chain from Sinorhizobium meliloti 1021

Subject, 1002 a.a., translesion DNA polymerase (imuC-like) (from data) from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  273 bits (698), Expect = 5e-77
 Identities = 230/871 (26%), Positives = 396/871 (45%), Gaps = 74/871 (8%)

Query: 10  THFSFLRAASSAEELFATARLMGIEALGVVDRNSLAGIVRALEASRATGLRLVVGCRLDL 69
           ++FSF       +E+   A+ +G++A+ + D N  A +   L+A++A  +  V+G  +D 
Sbjct: 7   SYFSFRYGTMPVQEMVDQAKKLGVKAMALTDINCTAAVYPFLKATKAANIHGVIG--IDF 64

Query: 70  QDGMS--ILVYPTDRAAYSRLTRLLTLGKGRGGKANCIIHFDDVALYAEGLIGILVPDLA 127
           ++G+    +    +   +  + R L+  KG+         F   A           P   
Sbjct: 65  RNGIDQQYIGLALNHHGFFEMNRHLSDHKGKKRP------FPQKA-----------PQWQ 107

Query: 128 DEVCAVQLRKIAEVFGDRAYVSLCLRRRPNDQLQLHELTNLAVKHRVKTIVTNDVLFHEH 187
           +        +     G R Y+ +     P DQL+   L +  +  + + I+   V FH  
Sbjct: 108 NTAVIYPFPQPYFKLGPREYLGI-----PADQLK-KALRSPWIAEKDRWILLQSVTFHSQ 161

Query: 188 GRRQLQDVVTCIRTGMTIDDVGFERERH-ADRYLKPPEEMARLFPAYPEALARTMEIVER 246
               +  ++ CI   + +  +    + + +DR+    E   R  P Y   L +T  ++ R
Sbjct: 162 QSFNIHRLLRCIELNILLSKLPTSEQGNLSDRFYSTLELAERCAPHY-WLLQQTHALLSR 220

Query: 247 CRFSLEELVYQYPEEALILGMTAQQSLQHYT---WEGVRARYPEGLPTHVEKTIRHELAL 303
           CRF  +   YQ       +  + Q+ L   T   ++G + RY   L    E  I  EL +
Sbjct: 221 CRFEQD---YQPVANKKSVYGSEQEDLAQLTALTYQGAKNRYGTPLSERQETRILKELDI 277

Query: 304 IETMKYAPYFLTVFSIVRYARSQGILCQGRGSAANSAVCYVLGITSIDPETNDLLFERFV 363
           I    +  YFL  + IV++AR +G    GRGS ANS V Y L IT +DP   DL FERF+
Sbjct: 278 IRQKDFVSYFLINYEIVKFARERGFYYVGRGSGANSIVAYCLNITDVDPIELDLYFERFI 337

Query: 364 SQERDEPPDIDVDFEHERREEVIQWIY---KTYGHDKAALCSTVTRYRAKGAIRDVGKAL 420
           +  R  PPD D+DF    R+EVIQ I+    T  H+   L +T   ++   +IR++GK  
Sbjct: 338 NLYRSTPPDFDIDFSWRDRDEVIQHIFHKHNTEDHEHVCLLATHNTFQINSSIRELGKVF 397

Query: 421 DLPEDLIRTLSSGIWSWSETVGERQVRELGLNPDDRRLTLTLRLAQQLMGAPRNLSQHPG 480
            LP+  I  L +             V + G    DR   L L+ +Q + G P +LS H G
Sbjct: 398 GLPKTDIEALIN------------HVVKPGNYIPDRIGALVLKYSQLIHGMPSHLSIHAG 445

Query: 481 GFVLTHDRLDDLVPIEPATMADR-----QVIEWDKDDIEALKFLKVDVLALGMLTCMAKA 535
           G +++        PI   T  D       +  +D    E + F K D+L+   L  +  +
Sbjct: 446 GILISQQ------PIHYYTATDLPPKGFPISHFDMVTAEEIGFAKFDILSQRGLGHIRDS 499

Query: 536 FALISEHKHEDIDLATIP--QEDPATYAMIRKADTLGTFQIESRAQMSMLPRMKPRTFYD 593
             +I +++ + +D+  I   + D      +RK  T+G F +ES A   +L +++   +  
Sbjct: 500 LEIIEKNQGKKVDIHRIKDFKHDEKIKQHLRKGHTIGAFYVESPAMRMLLAKLEVDEYLG 559

Query: 594 LVIQVAIVRPGPIQGDMVHPY-LRRREGKEKVEYPTPELEAVLHKTLGVPLFQESAMRVA 652
           LV   +I+RPG  +  M+  Y LR R+ + +     P L  ++ +T G+ ++QE  ++VA
Sbjct: 560 LVAASSIIRPGVARSGMMREYILRHRKPEMRKSRAHPILHDLMPETYGIMVYQEDVIKVA 619

Query: 653 MVCAGFTGGEADQLRKSMA-TFKFTGGVSRFKDKLVNGMIRNGYTKEFAEKTFSQLEGFG 711
              AG +  EAD LR+ M+  F+      + K+      +  G+  +   + + Q+E F 
Sbjct: 620 HYFAGLSFDEADVLRRGMSGKFRSRAAFLKVKESFFKKSMEKGHAPKITSEIWFQVESFA 679

Query: 712 SYGFPESHAASFALIAYASNYIKCYFPDVFCAALLNSQPMGFYAPAQIVRDAREHGVEVR 771
            Y F + H+ASFA+ +Y S Y+K +FP  F   ++N+   GFY     +R+ + +  +V+
Sbjct: 680 GYSFAKGHSASFAVESYQSLYLKAHFPLEFMVGVINNFG-GFYKTEFYIRELQGYHADVQ 738

Query: 772 PICINRSRWDCMLEPIDGSGGHAVRLGMRLVRGLATADAARIVAARADE-PFTSVDDMWR 830
              +N S +  +++      G  V LG   ++ L       I+  R  E PFT + D   
Sbjct: 739 LPHLNESDYLTVIK------GTTVYLGFIHLKYLQKDITNTILQNRETEGPFTGLRDFIN 792

Query: 831 RSGVPVASLVELAEADAFLPSLSLERRDALW 861
           R  + +  L+ L   DAF    +  +++ LW
Sbjct: 793 RIAISLEQLLILIRIDAF-RFTAKRKQELLW 822