Pairwise Alignments

Query, 1087 a.a., DnaE3 DNA polymerase III alpha chain from Sinorhizobium meliloti 1021

Subject, 1428 a.a., DNA-directed DNA polymerase III (polc) from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  365 bits (936), Expect = e-104
 Identities = 294/1100 (26%), Positives = 490/1100 (44%), Gaps = 115/1100 (10%)

Query: 3    YAELQVTTHFSFLRAASSAEELFATARLMGIEALGVVDRNSLAGIVRALEASRATGLRLV 62
            ++ L V T +S L+A S    + A A+   + A+ + D  ++      ++A+    ++ V
Sbjct: 245  FSHLHVHTQYSILQATSEIPAMVARAKEFNMPAIAMTDHGNMMAAFHFVKAAMDNDIKPV 304

Query: 63   VGCRLDL----------QDGMSILVYPTDRAAYSRLTRLLTLGKGRG-------GKANCI 105
            VGC  ++           DG   ++   ++  Y  L +L +    +G        K   +
Sbjct: 305  VGCEFNICRDHQNKSQKDDGFQAVLLAKNKTGYHNLAKLASFAYTQGFYYVPRIDKELLV 364

Query: 106  IHFDDVALYAEGLIGILVPDLADEVCAVQLRKI----AEVFGDRAYVSLCLRRRPNDQLQ 161
             +  D+     GL G  VP L   V   Q  +      E FG+  YV L     P ++  
Sbjct: 365  QYKGDIIATTGGLWGE-VPFLILNVGETQAEEAFVWWKEQFGEDFYVELNRHGIPEEEKV 423

Query: 162  LHELTNLAVKHRVKTIVTNDVLFHEHGRRQLQDVVTCIRTGMTIDD-------------V 208
               L   A K+ VK    N+  ++     +  D++ C++ G  +D               
Sbjct: 424  NEVLLRFAQKYDVKYFAANNTYYNTKNDAKAHDILLCVKDGEKVDKPKRYIGKKGREFRY 483

Query: 209  GFERERHADRYLKPPEEMARLFPAYPEALARTMEIVERC------------RFSLEELVY 256
            GF  E     Y+K PEEM +LF   PEA+  T EI+E+             +F++ E  +
Sbjct: 484  GFPNEEF---YIKTPEEMKKLFADLPEAIECTNEIIEKVEPYKLAREVLLPKFNIPEQ-F 539

Query: 257  QYPEEALILGMTAQQS-LQHYTWEGVRARYPEGLPTHVEKTIRHELALIETMKYAPYFLT 315
            Q P++    G   + + L+H T+EG + RYPE +   + + +  EL++I    Y  YFL 
Sbjct: 540  QDPQDDEDGGKRGENAYLRHLTYEGAKRRYPE-ITEEIRERLDFELSIIANTGYPGYFLI 598

Query: 316  VFSIVRYARSQGI-LCQGRGSAANSAVCYVLGITSIDPETNDLLFERFVSQERDEPPDID 374
            V      AR  G+ +  GRGSAA SAV Y +GIT++DP   DLLFERF++ +R   PDID
Sbjct: 599  VQDFTTAAREMGVSVGPGRGSAAGSAVAYCIGITNVDPVAYDLLFERFLNPDRVSLPDID 658

Query: 375  VDFEHERREEVIQWIYKTYGHDKAALCSTVTRYRAKGAIRDVGKALDLP-EDLIRT---- 429
            +DF+   R++VI ++ + YG ++ A   T     AK AIRD  +ALDLP  D  R     
Sbjct: 659  IDFDDHGRQKVIDYVIEKYGANQVAQIITYGTMAAKSAIRDTARALDLPLSDADRLAKLV 718

Query: 430  -----------------LSSGIWSWSETVGERQVRELGLNPDDRRLTLTLRLAQQLMGAP 472
                             L+  + + SE + ++    + ++  +  L+ T+  A+ L G+ 
Sbjct: 719  PDIKLKALFGLANDRGKLAEKLKNNSENI-DKAYELINISKGNDDLSKTINQAKILEGSV 777

Query: 473  RNLSQHPGGFVLTHDRLDDLVPIEPATMADRQVIEWDKDDIEALKFLKVDVLALGMLTCM 532
            RN   H  G ++T D + + VP+  A  +D    ++D   +E    LK+D L L  LT +
Sbjct: 778  RNTGIHACGVIITPDDITNFVPVALAKDSDMYCTQFDNSVVENAGLLKMDFLGLKTLTLI 837

Query: 533  AKAFALISEHKHEDIDLATIPQEDPATYAMIRKADTLGTFQIESRAQMSMLPRMKPRTFY 592
              A  ++ E    ++D    P +D  TY + ++ +T+G FQ ES      +  +KP  F 
Sbjct: 838  KDAVRIVKERHGIELDPENFPIDDKETYELFQRGETVGIFQYESPGMQKYMRELKPTVFA 897

Query: 593  DLVIQVAIVRPGPIQGDMVHPYLRRREGKEKVEYPTPELEAVLHKTLGVPLFQESAMRVA 652
            DL+   A+ RPGP+  + +  +++R+ G E + Y   ++E  L +T G+ ++QE  M ++
Sbjct: 898  DLIAMNALYRPGPL--EYIPSFIKRKHGLEPIAYDLDDMEEYLQETYGITVYQEQVMLLS 955

Query: 653  MVCAGFTGGEADQLRKSMATFKFTGGVSRFKDKLVNGMIRNGYTKEFAEKTFSQLEGFGS 712
               AGFT GEAD LRK+M   K    + + K K VN     G+ K   EK +   E F S
Sbjct: 956  QKLAGFTKGEADVLRKAMGK-KLRDVLDKMKPKFVNQAAEKGHDKAKLEKIWKDWEAFAS 1014

Query: 713  YGFPESHAASFALIAYASNYIKCYFPDVFCAALLNSQPMGFYAPAQIVRDAREHGVEVRP 772
            Y F +SH+  +A +AY + Y+K ++P  + A++L++           + + +  G+EV  
Sbjct: 1015 YAFNKSHSTCYAWVAYQTAYLKAHYPAEYMASVLSNNMNDITQVTFFMEECKRMGIEVLG 1074

Query: 773  ICINRSRWDCMLEPIDGSGGHAVRLGMRLVRGLATADAARIVAARADE-PFTSVDDMWRR 831
              +N S+ D      +G     +R G+  ++G   A    ++  RA+  P+ S+ D  +R
Sbjct: 1075 PDVNESK-DGFTVNQEGQ----IRFGLAAIKGAGGAAVHSVIEERAENGPYKSIFDFTQR 1129

Query: 832  ---SGVPVASLVELAEADAFLPSLSLERRDALWAIKALRDEPLPLFTAAADREARAIAEQ 888
                 V   +L  LA A  F       RR  L A     +    L   A     +   E 
Sbjct: 1130 VNLRSVNKKTLESLAMAGGFDCFPDHHRRQYLEA----PENDATLIEKAVKYAQKKAQEA 1185

Query: 889  EEPEVELRQMTDGQNV-------VEDYSH----------TGLTLREHPLRFMR---DDLA 928
            E  +V L     G  V       +E +S            GL +  HPL   +   D   
Sbjct: 1186 ESSQVSLFGGGSGMEVPMPSITPIEPFSQLQQLNIEKEVVGLYISGHPLDQFKVEFDSFT 1245

Query: 929  KRRIVTCAQAMTAHDGQWLMAAGLVLVRQRPGSAKGVMF--ITIEDETGIANIVVWPKLF 986
               +   A          + AAG+V       +  G  F  +T+ED  G     ++ + +
Sbjct: 1246 NTPLSEFANTEALKTKGEIKAAGVVTSFAHRTTKNGNPFGTLTLEDYNGGHTFFLFGEDY 1305

Query: 987  ERSRRVVLGASMMAINGRIQ 1006
             + +   +    + + G +Q
Sbjct: 1306 IKYKEYFMTGWFLYVTGSVQ 1325