Pairwise Alignments

Query, 474 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 433 a.a., DNA polymerase IV from Xanthobacter sp. DMC5

 Score = 54.3 bits (129), Expect = 8e-12
 Identities = 65/265 (24%), Positives = 109/265 (41%), Gaps = 7/265 (2%)

Query: 2   VIARSGSKRWISAADTAATKLGLRVGMPAAKAQALVQGLVMIDADTAADLAALERLALWA 61
           +I   G +  +S A   A   G+R  MP  KA AL    V++  +       + R     
Sbjct: 69  LIIGGGKRGVVSTACYIARIHGVRSAMPMFKALALCPDAVVLKPNMEK-YVKVGREVRAR 127

Query: 62  FSQYSPVVAMDPPDGIVMDTEGADHLQGGEDLMLSSLVNRFRGRGLAARAAI---ADTWG 118
               +P+V     D   +D  G + L         +   R   R +    ++   A+ + 
Sbjct: 128 MKALTPLVEPLSIDEAFLDLSGTEALHQASPARTLARFARDVEREVGITVSVGLAANKFL 187

Query: 119 AAHALARTTDRETVIVGRGDAARAANRLPLSSL-RLPAETVQSLRTLGFTTVGDLAATPR 177
           A  A      R   ++G+ +AA      P++ +  + A     L   GF+T+GDL     
Sbjct: 188 AKIASDLDKPRGFSVIGQSEAAEFLAPRPVTFIWGVGAAFGGKLARDGFSTIGDLQRAEP 247

Query: 178 APLTLRFGLEVGRRLDQM-FGHIAEPIDPIRPAELVEVQKSFAEPIGAPETIEKYVSRLV 236
           A L  R+G E G RL ++ FG     ++P R A+ V  + +F   IGA   +E+ +  L 
Sbjct: 248 ADLARRYGAE-GLRLSRLAFGLDTRKVEPEREAKSVSAETTFDRDIGALRPLEQTLYALS 306

Query: 237 RQLCLELERRGLGVRRADLIVHRVD 261
            ++   L+R G+  R   L +   D
Sbjct: 307 EEVSERLKRAGIAGRSVTLKLKSAD 331