Pairwise Alignments

Query, 367 a.a., NolF secretion protein from Sinorhizobium meliloti 1021

Subject, 388 a.a., RND transporter MFP subunit from Pseudomonas simiae WCS417

 Score = 88.6 bits (218), Expect = 3e-22
 Identities = 69/318 (21%), Positives = 144/318 (45%), Gaps = 15/318 (4%)

Query: 46  VSTAVRQDMANEVRIVGSLTPIRRSTLTSRVSSTIIELPVQIGDVVNAGDLLVRFERGAL 105
           V +  +QD+   V  +GS+  +    +  +V   + +L V+ G +V AGDLL   +  ++
Sbjct: 42  VVSVAQQDIPRFVSGIGSVLSLHSVVIRPQVDGILTKLLVKEGQLVKAGDLLATIDDRSI 101

Query: 106 ESAVTGRKAEADALSAQTELAEAVLERNTRLGERGAASEATRLAALADVLDLRAQLRSKQ 165
            +++   KA+     AQ ++A   L+R   L      S+ T     A V  L+A  +  Q
Sbjct: 102 RASLDQAKAQLGESQAQLQVALVNLKRYKALSVDDGVSKQTYDQQQALVNQLKATAQGNQ 161

Query: 166 AEVSDAERSLSHAEVRAEFGGVIAARSVEEGQTVPLNTQ--LMTIVELNRLEVDAGVPTS 223
           A +  A+  LS+ ++R+   G +  R+V+EG  +  +    L ++ +++ + V+  +P  
Sbjct: 162 AAIDSAQVQLSYTQIRSPVSGRVGIRTVDEGNFLRTSDAQGLFSVTQIDPIAVEFSLPQQ 221

Query: 224 RIPLIR--LKQSVELTVEGFPGRTFSGE---------VARISPTADAGSRAVRVFIAVDN 272
            +P ++  +    + +V+ + G    G+         ++ I     + +  +R     +N
Sbjct: 222 MLPTLQGLIAAPTQASVDAYLGADTDGQTGDLLGEGHLSLIDNQISSTTGTLRAKAEFNN 281

Query: 273 EEGLLRGGMFTIGDLRVDDQKDVIALPAASIRHDADGFFVLKVEAGVLQRRPVGLGRSWS 332
               L  G      ++    K+ + +P   ++   D  FV +V    +   PV +  ++ 
Sbjct: 282 ASQRLWPGQLVTIKIQTALDKNALVVPPTVVQRGLDSHFVYRVNGDKVDVVPVQV--TYQ 339

Query: 333 DRDLVQVSGVSEGDVIVT 350
           D D+  + GV  GDV+V+
Sbjct: 340 DSDVNIIKGVQAGDVLVS 357