Pairwise Alignments

Query, 367 a.a., NolF secretion protein from Sinorhizobium meliloti 1021

Subject, 376 a.a., RND transporter from Pseudomonas simiae WCS417

 Score =  108 bits (270), Expect = 2e-28
 Identities = 90/335 (26%), Positives = 154/335 (45%), Gaps = 30/335 (8%)

Query: 46  VSTAVRQDMANEVRIVGSLTPIRRSTLTSRVSSTIIELPVQIGDVVNAGDLLVRFERGAL 105
           V+TA  Q     V  VG+L  ++   L+  ++ T+ ++  + G  V  G  LV+ +  A+
Sbjct: 46  VATATEQPWQLRVSSVGTLKALQGVNLSLEIAGTVKDVQFESGQKVKTGQPLVQLD-SAV 104

Query: 106 ESAVTGRKAEADALSAQTELAEAVLERNTRLGERGAASEATRLAALADVLDLRAQLRSKQ 165
           ESA+          +AQ +L  A L+       RG+    ++  +  +   L AQL+  +
Sbjct: 105 ESALLE--------TAQADLGLAQLDYG-----RGSQLVGSQAISKGEFDRLSAQLQKNK 151

Query: 166 AEVSDAERSLSHAEVRAEFGGVIAARSVEEGQTVPLNTQLMTIVELNRLEVDAGVPTSRI 225
           A V+  + SL+   + A FGG I  R V+ G  +   T + T+ +L+ L VD  +P   +
Sbjct: 152 ATVNQLKASLAKKHIVAPFGGTIGIRQVDVGDYLASGTVIATLQDLSSLYVDFYIPEHAV 211

Query: 226 PLIRLKQSVELTVEGFPGRTFSGEVARISPTADAGSRAVRVFIAVDNEEGLLRGGMFTIG 285
           P +   Q V++ V  +PG  F G ++ I+P  +  +R V V   + N EG L  GMFT  
Sbjct: 212 PKVAPGQPVQVEVSAYPGEQFPGSISAINPKVENSTRNVLVRATLANPEGKLLPGMFTRL 271

Query: 286 DLRVDDQKDVIALPAASIRHDADGFFVL-----KVEAGVLQRRPVGLGRSWSDRDLVQV- 339
           D+ + +    I +P  +I +   G  V      K E G +++   G     ++R  V+  
Sbjct: 272 DVLLPNPAPQIVVPEGAITYTLYGNSVYAVAEKKTEGGEVEKDADGKPLLIAERRFVETG 331

Query: 340 ----------SGVSEGDVIVTAPLPDLVVNTPVII 364
                      G+  G+ +V+A    L   TP+ I
Sbjct: 332 ERRGGLVLVSKGLKAGEQVVSAGQLKLDNGTPIAI 366