Pairwise Alignments

Query, 367 a.a., NolF secretion protein from Sinorhizobium meliloti 1021

Subject, 369 a.a., Multidrug efflux system, membrane fusion component => MexH of MexHI-OpmD system from Variovorax sp. SCN45

 Score =  116 bits (291), Expect = 8e-31
 Identities = 91/322 (28%), Positives = 151/322 (46%), Gaps = 21/322 (6%)

Query: 36  GSPIELAKADVSTAVRQDMANEVRIVGSLTPIRRSTLTSRVSSTIIELPVQIGDVVNAGD 95
           G  +  AK  V+TA +  +A  +  +G+L   R+  + + V   + ++    G  V AG 
Sbjct: 36  GGGMPPAKVAVATAQKTQVARFLSGIGTLEANRQVEVPAEVEGRVAKILFTPGGEVRAGQ 95

Query: 96  LLVRFERGALESAVTGRKAEADALSAQTELAEAVLERNTRLGERGAASEATRLAALADVL 155
           LLV+             + + + L+AQ   A+A+LER  RL  + AA++     A A   
Sbjct: 96  LLVQLNDAP-------EQGDMERLTAQRANAKALLERTRRLLPQQAATQEQLEQAQAAFD 148

Query: 156 DLRAQLRSKQAEVSDAERSLSHAEVRAEFGGVIAARSVEEGQTVPLNTQLMTIVELNRLE 215
                LR  QA        L    ++A F GV+  R V  GQ V     L+++ +   L 
Sbjct: 149 QASGDLRRAQAV-------LEQKRIKAPFDGVLGIRRVNLGQFVRAGDALVSLTDSRTLF 201

Query: 216 VDAGVPTSRIPLIRLKQSVELTVEGFPGRTFSGEVARISPTADAGSRAVRVFIAVDNEEG 275
            +  +P + +P+++  Q V L+V+ +PGR F G ++ I P   + +R VR+   +DN +G
Sbjct: 202 ANLTLPETALPVLKRNQQVALSVDAYPGRVFQGRLSTIEPQIGSDTRTVRLQATIDNADG 261

Query: 276 LLRGGMFTIGDLRVDDQKDVIALPAASIRHDADG---FFVLKVEAG---VLQRRPVGLGR 329
            L  GMF  G + +  + D I +P  +I +   G   F V   E G     Q+  V  G 
Sbjct: 262 ALTPGMFVNGKVALPARPDAITVPETAITYSTHGDSVFVVRPAEKGDGFTAQQVFVKAGE 321

Query: 330 SWSDRDLVQVSGVSEGDVIVTA 351
              D  +V  +G++ GD +VT+
Sbjct: 322 R-QDGLVVIENGLAPGDKVVTS 342