Pairwise Alignments

Query, 367 a.a., NolF secretion protein from Sinorhizobium meliloti 1021

Subject, 401 a.a., RND efflux system, membrane fusion protein from Sphingobium sp. HT1-2

 Score = 87.4 bits (215), Expect = 6e-22
 Identities = 89/363 (24%), Positives = 153/363 (42%), Gaps = 18/363 (4%)

Query: 9   LQKLAFATTLAVTIVLSQGRAIGQVKHGSPIELAKADVST----AVRQDM---ANEVRIV 61
           L+K+     +    V+  G A  ++   + +    AD S      V+  M    N++ + 
Sbjct: 20  LKKIGIGAAVVALAVVGVGVA-SRISATNELRETAADASVPTVAVVKPTMNGEGNDLVLP 78

Query: 62  GSLTPIRRSTLTSRVSSTIIELPVQIGDVVNAGDLLVRFERGALESAVTGRKAEADALSA 121
           G++     + + +R +  +      IGD V AG  L   +   L+  V   +A+     A
Sbjct: 79  GNVQAYNSAAIYARTNGYVRRWLADIGDRVRAGQPLAVLDAPDLDQQVAAAQADYQTALA 138

Query: 122 QTELAEAVLERNTRLGERGAASEATRLAALADVLDLRAQLRSKQAEVSDAERSLSHAEVR 181
              LAE   +R + +  + A S         D+    A   +  A V   +       + 
Sbjct: 139 NQRLAETTSKRWSAMLAQDAVSRQEADEKAGDLAARTAVSNAALANVKRLKAQQGFTRLA 198

Query: 182 AEFGGVIAARSVEEGQTVPLNTQ----LMTIVELNRLEVDAGVPTSRIPLIRLKQSVELT 237
           A F GV+ +RS + G  V         L T+ +++R+ +   VP      +R      LT
Sbjct: 199 APFDGVVTSRSAQIGALVVSGNAAAQPLFTVSDIHRMRIYVRVPQGYSASVRPGMGATLT 258

Query: 238 VEGFPGRTFSGEVARISPTADAGSRAVRVFIAVDNEEGLLRGGMFTIGDLRVD-DQKDVI 296
           +  +PGR+F+  +   S   DA S AV V +  +N +G L+ G F     +V   Q + +
Sbjct: 259 LPEYPGRSFNATLTSSSGAVDAQSGAVLVQLQAENPDGALKPGAFAQVSFKVGAGQGNGM 318

Query: 297 ALPAASIRHDADGFFVLKVEA-GVLQRRPVGLGRSWSDRDLVQV-SGVSEGDVIVTAPLP 354
            LP ++I +  +G  V  V A   +  +PV + R   +   VQ+ SG+S  D IV  P P
Sbjct: 319 TLPGSAILYSNNGPSVAVVGADNRITMKPVAIAR--DEGATVQIASGLSPNDRIVDTP-P 375

Query: 355 DLV 357
           D +
Sbjct: 376 DAI 378