Pairwise Alignments

Query, 367 a.a., NolF secretion protein from Sinorhizobium meliloti 1021

Subject, 392 a.a., ABC export system, membrane fusion protein from Pseudomonas putida KT2440

 Score = 83.2 bits (204), Expect = 1e-20
 Identities = 99/369 (26%), Positives = 163/369 (44%), Gaps = 48/369 (13%)

Query: 30  IGQVKHGSPIELAKADVSTAV--RQDMANEVRIVGSLTPIRRSTLTSRVSSTIIELPVQI 87
           +G +   + +      VST    R D+ + V  +G+L P R   + ++ S  I  L V++
Sbjct: 21  LGSLLAWTSLPFGAQPVSTVAVTRADIESSVTALGTLQPRRYVDVGAQASGQIRNLHVEV 80

Query: 88  GDVVNAGDLLVRFERGALES-------AVTGRKAEADALSAQTELAEAVLERNTRLGERG 140
           GD V+ G LLV  +    ++       ++   KA+     AQ +LA+  L+R   L   G
Sbjct: 81  GDQVHKGQLLVEIDPSTQQAKLDAGRFSIDNLKAQLAEQRAQLKLAQQQLKRQRDLAAVG 140

Query: 141 AASEATRLAALADV------LDL-RAQLRSKQAEVSDAERSLSHAEVRAEFGGVIAARSV 193
           A  E     A A +      +D+ +AQ+R   A +   E  L +  + A   G + A   
Sbjct: 141 ATREEDLQTAEAQLNVTQARIDMYQAQIRQANASLRSDEAELGYTRIFAPMDGTVVAVDA 200

Query: 194 EEGQTVPLNTQ---LMTIVELNRLEVDAGVPTSRIPLIRLKQSVELTVEGFPGRTFSGEV 250
            EGQT+    Q   ++ I +L+ + V A V  + I  I+   +   T      R ++  V
Sbjct: 201 REGQTLNAQQQTPLILRIAKLSPMTVWAQVSEADIGKIQPGMTAYFTTLAGGKRRWTSTV 260

Query: 251 ARISP-------------------TADA-GSRAVR--VFIAVDNEEGLLRGGMFTIGDLR 288
            ++ P                   TA A GS+ V+  V + VDN +G L   M T     
Sbjct: 261 RQVLPIPPKPLDQTSQGGGSPASATAGATGSQVVQYTVLLDVDNPDGALMAEMTTQVFFV 320

Query: 289 VDDQKDVIALPAASI-RHDADGFFVLKV--EAGVLQRRPVGLGRSWSDRDLVQV-SGVSE 344
           V     V++ P A++   D +G  + +V    G +++R V  G   SDR  VQ+  G+SE
Sbjct: 321 VGQASQVLSAPLAALDDSDNEGLRLAQVFGRDGKVEQRKVRTG--LSDRLRVQILDGLSE 378

Query: 345 GD-VIVTAP 352
           GD +++ AP
Sbjct: 379 GDRLVIGAP 387