Pairwise Alignments

Query, 367 a.a., NolF secretion protein from Sinorhizobium meliloti 1021

Subject, 365 a.a., Multidrug efflux RND membrane fusion protein from Pseudomonas putida KT2440

 Score = 87.4 bits (215), Expect = 5e-22
 Identities = 80/325 (24%), Positives = 142/325 (43%), Gaps = 21/325 (6%)

Query: 43  KADVSTAVRQDMANEVRIVGSLTPIRRSTLTSRVSSTIIELPVQIGDVVNAGDLLVRFER 102
           K  ++TA +  +A +    G L  + +  + + +   I  +  + G  V AG LLV+   
Sbjct: 40  KVALATAEQVQLARQRFASGELEAVNQVQVAAEMPGRITRIAFESGQTVAAGQLLVQLN- 98

Query: 103 GALESAVTGRKAEADALSAQTELAEAVLERNTRLGERGAASEATRLAALADVLDLRAQLR 162
            A E A+  +      L A+   A+ VL+R+ +L    A S+   L   A  +D+     
Sbjct: 99  DAPEQALRVQ------LQARLRNADVVLQRSRKLRAMNAVSQEL-LDNAATAVDVA---- 147

Query: 163 SKQAEVSDAERSLSHAEVRAEFGGVIAARSVEEGQTVPLNTQLMTIVELNRLEVDAGVPT 222
             + E+   E  ++   +RA F G +  R V +GQ +     ++++ ++++L V+  +  
Sbjct: 148 --RGELQHVEALIAQKAIRAPFAGKLGIRRVHQGQYLAAGETIVSLADISQLHVNFALGE 205

Query: 223 SRIPLIRLKQSVELTVEGFPGRTFSGEVARISPTADAGSRAVRVFIAVDNEEGLLRGGMF 282
              P +   Q + LTV+   G+ F   V  + P     +R V+V  A+ N +G L+ GM+
Sbjct: 206 QAAPEVHAGQVLALTVDAVRGQDFQARVVAVDPVVST-ARLVQVQAALPNPQGQLQPGMY 264

Query: 283 TIGDLRVDDQKDVIALPAASIRHDADGFFVLKV-----EAGVLQRRPVGLGRSWSDRDLV 337
               L       V+A+P  +I + A G  V            + R  V  G  W  R  +
Sbjct: 265 AGVRLDAAQPSTVLAVPETAITYTAYGQTVFVATQDPQHGTRVSRVQVTTGERWQGRVEI 324

Query: 338 QVSGVSEGDVIVTAPLPDLVVNTPV 362
             SG++ GD +V +    L    PV
Sbjct: 325 -TSGLTPGDRVVVSGQLKLSDGMPV 348