Pairwise Alignments

Query, 367 a.a., NolF secretion protein from Sinorhizobium meliloti 1021

Subject, 363 a.a., efflux RND transporter periplasmic adaptor subunit from Dickeya dianthicola ME23

 Score =  110 bits (276), Expect = 5e-29
 Identities = 93/326 (28%), Positives = 156/326 (47%), Gaps = 9/326 (2%)

Query: 46  VSTAVRQDMANEVRIVGSLTPIRRSTLTSRVSSTIIELPVQIGDVVNAGDLLVRFERGAL 105
           +S    ++ A  + + G++ P   S L+ + +  ++   V++GD V AG +L R +  AL
Sbjct: 36  LSATALKESAGGMSLAGTVQPRVTSALSFQATGRVVSRYVEVGDEVKAGQVLARLDPLAL 95

Query: 106 ESAVTGRKAEADALSAQTELAEAVL--ERNTRLGERGAASEATRLAALADVLDLRAQLRS 163
             AV  + A+A    AQ +L  AV+  +R   L      S  +   A   +   +A +  
Sbjct: 96  AFAV--QSAQASVQDAQAKLQNAVITAKRQRSLAAVNVTSVESLEEAEQSLTAAQAAVDV 153

Query: 164 KQAEVSDAERSLSHAEVRAEFGGVIAARSVEEGQTVPLNTQLMTIVELNRLEVDAGVPTS 223
            QA    A   L++AE++A F GVI + SVE GQTV     ++ I  L   +    +P S
Sbjct: 154 AQARRRKASEQLNYAELKAHFDGVITSVSVETGQTVAAGQAVLQIAYLGERDAVVDLPES 213

Query: 224 RIPLIRLKQSVELTVEGFPGRTFSGEVARISPTADAGSRAVRVFIAV-DNEEGLLRGGMF 282
           ++  + L    E+ ++  P   ++GE+  I+P ADA +R  RV IA+ D  E    G + 
Sbjct: 214 QLKDVTLGHRFEVALQMDPAVKWTGELREIAPAADAATRMRRVKIAIHDAPEAFRLGTVV 273

Query: 283 TIGDLRVDDQKDVIALPAASI--RHDADGFFVLKVEAGVLQRRPVGLGRSWSDRDLVQV- 339
           T+  L   +    + +PA +I  R  A   +V+   +  +  R + L  + S  D V+V 
Sbjct: 274 TVSPLMARNTDKPLVVPATAILERQQAHFVWVINPSSLTVSLREIQLMPA-SQADSVRVL 332

Query: 340 SGVSEGDVIVTAPLPDLVVNTPVIIE 365
            G+ EG+ IV A +  L     + IE
Sbjct: 333 GGLQEGEQIVIAGVNSLQPGQKIRIE 358