Pairwise Alignments

Query, 367 a.a., NolF secretion protein from Sinorhizobium meliloti 1021

Subject, 407 a.a., RND family efflux transporter, MFP subunit from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 73.2 bits (178), Expect = 1e-17
 Identities = 68/324 (20%), Positives = 136/324 (41%), Gaps = 24/324 (7%)

Query: 46  VSTAVRQDMANEVRIVGSLT--PIRRSTLTSRVSSTIIELPVQIGDVVNAGDLLVRFERG 103
           + T   + ++  V   G L   P   +T+T+ + + +  + V  GD V  G +L      
Sbjct: 69  IDTIPTRSLSGVVEANGQLEVPPQHEATVTAILGANVNSIKVIEGDKVRKGQVLAYLSHP 128

Query: 104 ALESAVTGRKAEADALSAQTELAEAVLERNTRLGERGAASEATRLAALADVLDLRAQLRS 163
            L    T  +       ++ +  E  ++R  RL E    S  T    LAD   ++ +++ 
Sbjct: 129 NL----TNLQTNYVKAYSRFQYLEKEMQRQKRLYEEEVGSGKTYQETLADYNSMKGEVKG 184

Query: 164 KQAEVSDAERSLSHAE---------VRAEFGGVIAARSVEEGQTVPLNTQLMTIVELNRL 214
            +A++     ++ + +         V +   G +    V+ GQ V   T +  IV ++ +
Sbjct: 185 YEAQLKQLNLNIENIQGGDIYEYVPVVSPIKGYVEKVKVQLGQYVDPQTVMFMIVNIDHI 244

Query: 215 EVDAGVPTSRIPLIRLKQSVELTVEGFPGRTFSGEVARISPTADAGSRAVRVFIAVDNEE 274
             D  V    +  ++  Q +  TVE  PG T + ++  +    +   +AV V   +D +E
Sbjct: 245 HADLMVFEKDVHKVKKGQKLSFTVESVPGNTLTAKIYSVGKQFEQKPKAVHVHAEIDQKE 304

Query: 275 GLLRGGMFTIGDLRVDDQKDVIALPAASIRHDADGFFVLKVEAGVLQRRPVGLGRSWSDR 334
             L  GM+  G +R  + + V ALP ++I  +    ++   EA     +       W+ +
Sbjct: 305 DFLIPGMYINGKIRTGNTQ-VKALPESAIIEEEGKPYIFMAEAHEEDGK-----TEWAFK 358

Query: 335 DLVQVSGVSEG---DVIVTAPLPD 355
            +   +G++E    ++ +  PLPD
Sbjct: 359 AVEVRTGINEDGWVEIKLLEPLPD 382