Pairwise Alignments

Query, 367 a.a., NolF secretion protein from Sinorhizobium meliloti 1021

Subject, 358 a.a., HlyD family secretion protein from Agrobacterium fabrum C58

 Score = 87.4 bits (215), Expect = 5e-22
 Identities = 80/312 (25%), Positives = 137/312 (43%), Gaps = 5/312 (1%)

Query: 41  LAKADVSTAVRQDMANEVRIVGSLTPIRRSTLTSRVSSTIIELPVQIGDVVNAGDLLVRF 100
           L   DV  A ++ +     I G +    ++ L+ RVS  IIE  V +G  V  G LL R 
Sbjct: 30  LRTVDVVAAEKKPVDRGSVITGEVRARVQTDLSFRVSGKIIERLVDVGARVKTGQLLARI 89

Query: 101 ERGALESAVTGRKAEADALSAQTELAEAVLERNTRLGERGAASEATRLAALADVLDLRAQ 160
           +    ++ +    A   +  AQ   A+   +R   L +    S +    A   +L  +  
Sbjct: 90  DPEEQKADIDVALANLQSAEAQQTQAQLTFDRQQNLFKTQVTSRSAVDKAQETLLTTQGA 149

Query: 161 LRSKQAEVSDAERSLSHAEVRAEFGGVIAARSVEEGQTVPLNTQLMTIVELNRLEVDAGV 220
           +RS QA++  A  +LS+ E+RA+  GVI AR+VE GQ       + T+      +    V
Sbjct: 150 VRSAQAQLDTARDALSYTELRADADGVITARNVEVGQVAQAAQLVFTLAHDGPRDAVFDV 209

Query: 221 PTSRIPLIRLKQSVELTVEGFPGRTFSGEVARISPTADAGSRAVRVFIAVDNEEGLLRGG 280
             S      +   V +++   P +  +  V  ISPT D  +  +RV + ++ +  +  G 
Sbjct: 210 YESLFLERDIDNLVNVSLLSDPAQIVAAPVREISPTIDPDNGTIRVKVGLNGDMTMPLGA 269

Query: 281 MFTIGDLRVDDQKDVIALP--AASIRHDADGFFVLKVEAGVLQRRPVGLGRSWSDRDLVQ 338
             + G  R   Q D I LP  A + +  A   +++   +  +  RPV +   +     V 
Sbjct: 270 PVS-GHFRF-RQIDAIELPWSAMASQDGAPAVWLVDPRSSEVAMRPVQVA-DYETGQFVV 326

Query: 339 VSGVSEGDVIVT 350
             G++ GD++VT
Sbjct: 327 TEGLNPGDLVVT 338