Pairwise Alignments

Query, 367 a.a., NolF secretion protein from Sinorhizobium meliloti 1021

Subject, 432 a.a., HlyD family secretion protein from Agrobacterium fabrum C58

 Score = 93.6 bits (231), Expect = 9e-24
 Identities = 90/344 (26%), Positives = 161/344 (46%), Gaps = 23/344 (6%)

Query: 18  LAVTIVLSQGRAIGQVKHGSPIELAKADVSTAVRQ-DMANEVRIVGSLTPIRRSTLTSRV 76
           +A  IVL  G  +G         +A    +   RQ D++  V   GS+ P  +  ++S +
Sbjct: 39  IAAAIVLIGG-GLGYYYQSRAAGVAYNYTTEPARQGDLSVIVTSTGSVQPTDQVDISSEL 97

Query: 77  SSTIIELPVQIGDVVNAGDLLVRFERGALESAVTGRK-----AEADALSAQTEL--AEAV 129
           S T+ ++ V     V +GD+L   +   LE+ V   +     A+A+ L A+ +L  A+  
Sbjct: 98  SGTVRKVNVTYNTPVKSGDILAELDTNKLEADVQSARAKLASAKANVLKARADLGSAKTS 157

Query: 130 LERNTRLGERGAASEA-------TRLAALADVLDLRAQLRSKQAEVSDAERSLSHAEVRA 182
           +ER   L +   +S+        T  AA A +    A + S +A++  AE +L  A++ +
Sbjct: 158 MERLRSLVQSRVSSQQDLDAAQFTHDAAAATLQVNEATVLSAEADLRLAEVNLGKAKIVS 217

Query: 183 EFGGVIAARSVEEGQTV--PLNTQLMTIV--ELNRLEVDAGVPTSRIPLIRLKQSVELTV 238
              GVI  RSV+ G TV   LN  ++  +  +L  +E+   V  + +  +   Q     V
Sbjct: 218 PIDGVILTRSVDPGATVASSLNAPVLFTIAGDLRHMELQVSVDEADVGKVETGQKATFNV 277

Query: 239 EGFPGRTFSGEVARISPTADAGSRAV--RVFIAVDNEEGLLRGGMFTIGDLRVDDQKDVI 296
           + +P R+F  E+  +   ++  S  V  +  + VDN E LLR GM    ++ V++ KD +
Sbjct: 278 DAYPDRSFPAEIETVRFASETVSNVVTYKGILTVDNAELLLRPGMTATANIIVEEIKDTL 337

Query: 297 ALPAASIRHDADGFFVLKVEAGVLQRRPVGLGRSWSDRDLVQVS 340
            +P +++R+        +    +   RP  +GRS  +RD  Q +
Sbjct: 338 LVPNSALRYTPPRESASRGGGLMSLFRPPRMGRS-QNRDAGQAA 380