Pairwise Alignments

Query, 1065 a.a., NolG efflux transporter from Sinorhizobium meliloti 1021

Subject, 1034 a.a., RND efflux system, inner membrane transporter from Sphingobium sp. HT1-2

 Score =  499 bits (1286), Expect = e-145
 Identities = 329/1045 (31%), Positives = 552/1045 (52%), Gaps = 43/1045 (4%)

Query: 1    MFLTRISINHPVFATMMMVMILVLGLFSYGRLGVDHYPETDLPVVVVATTYTGASPESVE 60
            M L+ +S+  PVF+ ++ V++ ++GL  Y  L V  YP+TD P+V V TTYTGA+   VE
Sbjct: 1    MQLSDLSVRRPVFSAVVAVLMCIVGLVGYFSLSVREYPDTDPPIVSVETTYTGAAASVVE 60

Query: 61   SEISRPIEAALNTIGGIDTITSESYEGRSIVVVQFEVDVDSQDAAQEVRDRVARLETKFP 120
            + I++ IE A+  + GI TITS S +G S + ++F+   D   AA +VRDRV  +    P
Sbjct: 61   TRITQQIEDAVAGVQGIQTITSTSQDGTSNINIEFDPSRDIDSAANDVRDRVGSVTQDLP 120

Query: 121  DGVATPQVTRYKPEGQAILSVAVSSTSRTLPEITTLATRVINNRLSVISGVGQVSLIGSS 180
            +    P++ +   + ++IL +A S    +  +I+    R I +R + I GV +V++ G +
Sbjct: 121  EDALAPEIRKVDSDARSILFLAFSRPGWSPIQISDYLDRNIADRFAAIDGVARVTIGGEA 180

Query: 181  ERQVLVVVDPDRLGAYGLAVSTVIEAIRGENQDRAAGTLISGINQRIVTVEGRIANTSGF 240
                 +  + ++L A+GL  + V  A+R +N +  AG   S    + + VE   A    F
Sbjct: 181  RPSTRIWFNAEKLAAFGLTPADVEAALRTQNVELPAGRFESKDQNQTLRVERPFATPDQF 240

Query: 241  NRIIVAQ-RNGYPVYLSEVATILDTGAE--VTSLANYQGQTTLGLHIVKVQGANTVEVAS 297
             +++V +  +GY V L +VA I + GAE   +S  + QG T +G+ I++  GANT+EVA 
Sbjct: 241  AQLVVGRGEDGYQVKLGDVARI-EEGAENPYSSFRSNQG-TAIGIGIIRQSGANTLEVAQ 298

Query: 298  AVRREVSALNAELTKDNVQLTITRDNSRPIASQVSQVQRTLVEGGVLSVLIVFIFLNSWR 357
              +  +  L   L K  +++ I  D S  I   +  V  TL+E  +L +L++F+FL S R
Sbjct: 299  KAKALIKELEPTLPK-GMKVAIGTDESLFIERAIDNVYDTLIEAALLVILVIFLFLGSVR 357

Query: 358  STVITGLTLPISVIGTFAAIYALGFTLNIMTLMALSLSIGILIDDAIVVRENITRHLQMG 417
            +T++  +T+PI ++ T A ++ LG ++N++TL+A  L+IG+++DDAIVV EN+   ++ G
Sbjct: 358  ATIVPAVTVPICLLATCAVMWLLGLSINLLTLLAFVLAIGLVVDDAIVVLENVYHRVEQG 417

Query: 418  KDPVRAALDGTNEIGLAVLSTTLCIVAVFLPVAFMGGLIGRFFLQFGVTVAVAVVISLFV 477
             DP+ AA  GT ++G A++STTL + AVF+PV F+ G  G  F +  + +  A+  S F+
Sbjct: 418  DDPLVAAYLGTRQVGFAIISTTLVVCAVFVPVMFLAGQTGLLFRELAIAMIAAIGFSGFI 477

Query: 478  SFTLDPMLSSVWCDPQSQKTAKRGFFGQLIERFDQWFEGLASRYRSVIYFTFDYRKTTIA 537
            S +L PML S        K  K    G+L    D  F+ +   Y   + +T    K  + 
Sbjct: 478  SLSLAPMLCS--------KLLKNAERGRLARWVDDRFQRIEHGYGRWLDWTL---KKPLM 526

Query: 538  IVLGMFV---VSLLLVPRIGTEFLPPPDQGEVSISLEANEGASLDYMAAKVGQIERALRE 594
             +LG+ +   V+  L  R+  E  P  D G V  ++ A EG   D M A + +IE  L  
Sbjct: 527  PLLGVAIFLGVAFFLFTRLPAELAPAEDTGVVEANVNAPEGTGFDRMMAYMQKIENDLAF 586

Query: 595  FNYVSSTYSTI-----NSGEMRGFNKALVAVQLVHSSQRRLKTAETLGPIRRRLSRIAGL 649
                 +  + +       G    +N   V   L     R + TAE    I + ++   G+
Sbjct: 587  LRKDGTLQNLVIRTPGGFGTTDDYNNGNVIAFLRPWEDRTITTAEVATIINKVIADQPGV 646

Query: 650  EISVGQRSEV-VGSIKPLQLSILGDGDEELRRISDHITSVLAAIPGATEIESSIEKLRPT 708
              +   RS +  G   P+ + + G   E L    D I    A+ PG   ++S  ++ +P 
Sbjct: 647  RGNAAPRSGLGRGRGLPVNIVLAGSTYEGLVAARDRIMLAAASYPGLINLDSDYKETKPQ 706

Query: 709  LAVRVRREAASDLGVSIATIGDTLRSLVAGDAISVWNSPDGETHDVVVRLPAAGRENAAQ 768
            + +    + A DLGVS+  +   L+SL+    ++ +    GE + V+V+    GR+  A 
Sbjct: 707  MRIETDLQRAGDLGVSVNDVSQALQSLLGSRRVTTY-VDRGEEYRVLVQAERDGRQTLAD 765

Query: 769  LRNLPIATARMDDNGKPIMVLLDQVADVVESTAPAQITRKDLSRDIRISSNI-EGRTLGD 827
            L  + + + R       ++V L  V  V E   P Q+ R +  R I +++ +  G +LG 
Sbjct: 766  LERIQVRSRR------GVLVPLSAVVTVREVAGPRQLNRYNKLRAITLTAALAPGTSLGQ 819

Query: 828  VVADLKAAMTKMDIPVGFRISFGGDAENLTESTAYALQSLAMAVIFIYIILASQFGSFIQ 887
             +A L+    +   P    I + G++++L E+         + ++ +Y++LA+QF SFI 
Sbjct: 820  GLAFLEDQARQS--PEVLAIGYRGESQSLRETGGSIWIVFGLTILIVYLLLAAQFESFIH 877

Query: 888  PIAIIMTMPLSLMGVLLGLLFTGSTLNMFSMIGIMMLMGLVTKNAILLVDYSNLGVREGK 947
            P  II T+PL++ G  LGL  TG ++N++S IGI+ML+GL  KN IL+V+++N    EG 
Sbjct: 878  PGVIIATVPLAVAGGALGLAITGGSINLYSQIGIVMLVGLAAKNGILIVEFANQLRDEGM 937

Query: 948  SLRQSLADAGAVRLRPIVMTTLAMIFGMLPTALGLGEGGAQRAPMAHAIIGGLISSTLLS 1007
             + +++ +A   RLRPI+MT++A + G +P  L  G G A R  +   I+ G+  +TL++
Sbjct: 938  EIAEAIREAAKRRLRPILMTSIATVIGAVPLVLRGGAGAAARHSIGVVIVFGVSLATLIT 997

Query: 1008 LVFVPVVLTYLDAFAGRVRRWVPSP 1032
            L  +P+       F  RV +   SP
Sbjct: 998  LFLIPI-------FYSRVAKRTVSP 1015