Pairwise Alignments

Query, 308 a.a., NodD1 nod-box dependent transcriptional activator from Sinorhizobium meliloti 1021

Subject, 311 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  113 bits (283), Expect = 5e-30
 Identities = 84/305 (27%), Positives = 146/305 (47%), Gaps = 10/305 (3%)

Query: 1   MRFRGLDLNLLVALDALMTERKLTAAARRINLSQPAMSAAIARLRTYFGDELFSMQGREL 60
           M    +DLNL +  DA+ TE  LT A + + ++QPA+S A+ARLR  F D LF    + +
Sbjct: 1   MNLSKVDLNLFIVFDAIYTEANLTRAGQIVGITQPAVSNALARLRETFNDPLFVRTAQGM 60

Query: 61  IPTPRAEALAPAVRDALLHIQLSVIAWDPLNPAQSDRRFRIILSDFMILVFFARIVERVA 120
           +PTP A+ +   VR+AL  +++SV      NP Q+ + +RI ++D    V    + +R+ 
Sbjct: 61  VPTPMAQNIIGPVRNALSLLRVSVQESRIFNPQQAAKTYRISMTDLTEAVILPLLFQRLR 120

Query: 121 REAPGVSFE-LLPLDDDPHELLRRGDVDFLIFPDVFMSSAHPKAKLFDEALVCV---GCP 176
           R AP V  E  L    +  + L  G +DF +   +         KL ++  VC    G P
Sbjct: 121 RLAPTVVIESFLSKRRETTKELAAGRLDFAVDAPLNTDPQVRHVKLMEDRYVCAMRKGHP 180

Query: 177 TNKKLLGNISFETYMSMGHVAAQFGREMKPSVEQWLLLEHGFNRRIELVVPGFTLIPRLL 236
              K    ++ + Y+ + H+     R     V+   L + G  R+I L    + +  ++L
Sbjct: 181 LAGK--DKLTLDDYLGLTHIHISSRRNGLGHVD-LALGKMGLQRKIALRSQHYLMASQVL 237

Query: 237 SGTNRIATLPLRLVKYFEQTIPLRIVTSPLPPLFFTEAIQWPALHNTDPGNIWLREILLQ 296
             T+ + T+P R  +  E      +  + +PP+     + W    + DP N W+RE +++
Sbjct: 238 QQTDMVMTVPERFARRHELHW-FNLPVNDVPPV--ETHLYWHESTDQDPANRWMREQMIE 294

Query: 297 EASRI 301
              ++
Sbjct: 295 LCQQV 299