Pairwise Alignments

Query, 308 a.a., NodD1 nod-box dependent transcriptional activator from Sinorhizobium meliloti 1021

Subject, 298 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

 Score =  113 bits (282), Expect = 6e-30
 Identities = 72/291 (24%), Positives = 132/291 (45%), Gaps = 1/291 (0%)

Query: 6   LDLNLLVALDALMTERKLTAAARRINLSQPAMSAAIARLRTYFGDELFSMQGRELIPTPR 65
           LDL  L   D +     ++ AA R+ ++Q A S A+ +LR +F D LF+   + + PTP 
Sbjct: 4   LDLEWLAVFDEVYKTGNVSKAAERLGMAQAAASTALNKLRAHFDDRLFTRTAQGMQPTPH 63

Query: 66  AEALAPAVRDALLHIQLSVIAWDPLNPAQSDRRFRIILSDFMILVFFARIVERVAREAPG 125
           AE + P +R+AL  +  +       +PAQ+ RRFRI ++D   +V    +++ +   APG
Sbjct: 64  AERIYPNLREALAQLAQAQGNRSSFDPAQAQRRFRICMTDISEVVLLPGLLDHLRHAAPG 123

Query: 126 VSFELLPLDDDPHELLRRGDVDFLIFPDVFMSSAHPKAKLFDEALVCVGCPTNKKLLGNI 185
           V  E   +       L+ G+VD  +     + +   +  LF +  VC+    + ++   +
Sbjct: 124 VHIETEIISTLSGRRLQDGEVDLAVGFMPQLDAGFYQQTLFMQNFVCLAAQNHPRIGARL 183

Query: 186 SFETYMSMGHVAAQFGREMKPSVEQWLLLEHGFNRRIELVVPGFTLIPRLLSGTNRIATL 245
           + + + +  H            V+   L   G  R + + +  F  + R+++ T  +  +
Sbjct: 184 TRKRFEAEAHAVVSTSGTGHAIVDT-TLARLGLKRNVVVRLSSFLSVARIVAHTELLVVV 242

Query: 246 PLRLVKYFEQTIPLRIVTSPLPPLFFTEAIQWPALHNTDPGNIWLREILLQ 296
           P  L +      P++++  P     +     W    + DPGN WLR  L Q
Sbjct: 243 PRILGRVLATQEPVKLLEPPFALPDYAVKQHWHERFHADPGNAWLRRTLAQ 293