Pairwise Alignments

Query, 308 a.a., NodD1 nod-box dependent transcriptional activator from Sinorhizobium meliloti 1021

Subject, 326 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

 Score =  120 bits (301), Expect = 4e-32
 Identities = 99/314 (31%), Positives = 147/314 (46%), Gaps = 19/314 (6%)

Query: 1   MRFRGLDLNLLVALDALMTERKLTAAARRINLSQPAMSAAIARLRTYFGDELFSMQGREL 60
           + FR LDLNLL   D +M ER LT AAR ++++QPA+S A+ RLR   GDEL    G  +
Sbjct: 3   VNFRTLDLNLLRVFDEVMAERNLTRAARNLSITQPAVSNALRRLREVLGDELVRRSGAGV 62

Query: 61  IPTPRAEALAPAVRDALLHIQLSVIAWDPLNPAQSDRRFRIILSDFMILVFFARIVERVA 120
            PTPRA AL P VRDAL  +Q   +A    + A +D  F + ++D         +V+   
Sbjct: 63  EPTPRALALWPTVRDALRQLQ-HTLAPGEFDAATADTTFLLAMADATAAELIPGLVQIAE 121

Query: 121 REAPGVSFELLPLDD-DPHELLRRGDVDFLI--FPDVFMS----------SAHPKAKLFD 167
           +EAP +S  +LPL   DP  +L   +VD  +  FP V  S           A    +L+ 
Sbjct: 122 KEAPAISLRVLPLTTRDPRRMLELEEVDMAVGYFPAVIASLAARGQSGVGVAFETQRLYL 181

Query: 168 EALVCVGCPTNKKLLGNISFETYMSMGHVAAQFGREMKPSVEQWLLLEHGFNRRIELVVP 227
              VCV    +      ++ + Y +  H+   F       ++Q  L   G  RRI + V 
Sbjct: 182 GQYVCVMRRGHPLANAPLTLDDYCAARHLLVSFSGRPYGFIDQ-TLGAMGRERRIVVTVN 240

Query: 228 GFTLIPRLLSGTNRIATLPLRLVKY--FEQTIPLRIVTSPLPPLFFTEAIQWPALHNTDP 285
            F    R+++ ++ +  LP   V        + LR +    PP+   +AI W        
Sbjct: 241 QFFTAGRVVANSDLLTVLPRHFVTVTGIGDQLVLRDLPFDQPPV-HVDAI-WHRRAQHGH 298

Query: 286 GNIWLREILLQEAS 299
            + WLR  LL+ A+
Sbjct: 299 SHEWLRTALLRSAA 312