Pairwise Alignments

Query, 308 a.a., NodD1 nod-box dependent transcriptional activator from Sinorhizobium meliloti 1021

Subject, 307 a.a., LysR family transcriptional regulator from Sinorhizobium meliloti 1021

 Score =  112 bits (281), Expect = 8e-30
 Identities = 87/292 (29%), Positives = 140/292 (47%), Gaps = 10/292 (3%)

Query: 7   DLNLLVALDALMTERKLTAAARRINLSQPAMSAAIARLRTYFGDELFSMQGRELIPTPRA 66
           DLNLLV  + ++ ER +  AA R+NLS  A+S  + RLR    D LF    + ++PT RA
Sbjct: 11  DLNLLVLYEMVLEERNVGRAAERLNLSASAVSHGLGRLRRLLNDPLFLKTPKGVVPTERA 70

Query: 67  EALAPAVRDALLHIQLSVIAWDPLNPAQSDRRFRIILSDFMILVFFARIVERVAREAPGV 126
            ALA  + D L  ++  +   +P +PA + RRF I  +D    VF   +++ +AR+APG+
Sbjct: 71  RALAAPIADILARVRRVISTAEPFDPAHTRRRFTIGTAD-GFSVFLPPLLDEIARKAPGI 129

Query: 127 SFEL--LPLDDDPHELLRRGDVDFLIFPDVFMSSAHPKAKLFDEALVCVGCPTNKKLLGN 184
              +  + ++    +L  R  +D  + P   + +     +L++E  V V        L N
Sbjct: 130 DIVVRHMQMESALSDLDER-LIDVAVAPFYELPARFAAQRLYEEEFV-VAARIGHPFLKN 187

Query: 185 ISFETYMSMGHVAAQFGREMKPSVEQWLLLEHGFNRRIELVVPGFTLIPRLLSGTNRIAT 244
            + E Y  M H+      + +  V+Q LL      RR+ L VP F L   L+  T  ++ 
Sbjct: 188 PTLENYCRMQHLLVAPRGDPRGLVDQ-LLESRNLARRVALAVPNFMLALDLIVKTELVSV 246

Query: 245 LPLRLVKYFEQTIPLRIVTSPLPPLFFTEAIQ--WPALHNTDPGNIWLREIL 294
           LP R ++   +     + T+ LP      +IQ   P     D G  WL ++L
Sbjct: 247 LPKRFIEMHAER--FAVATARLPFDLAISSIQAVTPKAALMDAGLAWLLQVL 296