Pairwise Alignments

Query, 308 a.a., NodD1 nod-box dependent transcriptional activator from Sinorhizobium meliloti 1021

Subject, 309 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

 Score =  136 bits (343), Expect = 5e-37
 Identities = 97/293 (33%), Positives = 156/293 (53%), Gaps = 9/293 (3%)

Query: 4   RGLDLNLLVALDALMTERKLTAAARRINLSQPAMSAAIARLRTYFGDELFSMQGRELIPT 63
           R +DLNLL+AL AL++ER +T AA R++ SQPA+S A+A+LR +F D L   QG  +  T
Sbjct: 12  RKIDLNLLLALHALLSERHVTRAALRLHRSQPAVSHALAQLRKHFDDPLLVRQGGGMALT 71

Query: 64  PRAEALAPAVRDALLHIQLSVIAWDPLNPAQSDRRFRIILSDFMILVFFARIVERVAREA 123
            RA++LA  ++DAL +++ S++A     PA++ RRFR+ LSD+   +    ++  + + A
Sbjct: 72  ARAQSLAQPLQDALSNLE-SLLATPLFEPAKAQRRFRLSLSDYASRIILPHLLRHLRQVA 130

Query: 124 PGVSFELLPLDDDPH-ELLRRGDVDFL--IFPDVFMS-SAHPKAKLFDEALVCVGCPTNK 179
           PGV   +     +     L  G++D    +FP++    +A P   LF +  + V      
Sbjct: 131 PGVDLAISQASRETMLAQLLDGELDLALGLFPELPQDITAQP---LFADRFISVADRQVL 187

Query: 180 KLLGNISFETYMSMGHVAAQFGREMKPSVEQWLLLEHGFNRRIELVVPGFTLIPRLLSGT 239
              G+++ E +++  HV      +    +E+  L   G  RRI L +P ++    +L+GT
Sbjct: 188 PASGDMALEDWLARPHVLMAMRPDAFDEIER-ALAARGLQRRIALALPHWSAAVEVLAGT 246

Query: 240 NRIATLPLRLVKYFEQTIPLRIVTSPLPPLFFTEAIQWPALHNTDPGNIWLRE 292
           + I T+  R V    Q   LR  T PL    F     W    ++DPG+ WLRE
Sbjct: 247 DLILTVASRAVGSLRQHKTLRQFTPPLAIPSFDYQQAWHNRKDSDPGHRWLRE 299