Pairwise Alignments

Query, 308 a.a., NodD1 nod-box dependent transcriptional activator from Sinorhizobium meliloti 1021

Subject, 304 a.a., Transcriptional regulator MexT from Pseudomonas putida KT2440

 Score =  119 bits (297), Expect = 1e-31
 Identities = 91/307 (29%), Positives = 143/307 (46%), Gaps = 41/307 (13%)

Query: 4   RGLDLNLLVALDALMTERKLTAAARRINLSQPAMSAAIARLRTYFGDELFSMQGRELIPT 63
           R +DLNLL+  + LM ER +T AA ++ L QPA+SAA++RLR  F D LF   GR + P+
Sbjct: 7   RRVDLNLLIVFETLMHERSVTRAAEKLFLGQPAISAALSRLRNLFDDPLFVRTGRSMEPS 66

Query: 64  PRAEALAPAVRDALLHIQLSVIAWDPLNPAQSDRRFRIILSDFMILVFFARIVERVAREA 123
            RA  +   +  AL  I  +V      +PA S+  FRI LSD        ++++R+  EA
Sbjct: 67  ARAHEIFALLSPALDSISTAVSRAAEFDPATSNAVFRIGLSDDAEFALLPQLLKRIRAEA 126

Query: 124 PGVSFELLPLDDDPHELLRRGDVDFLIFPDVFMSS-------------AHPKAKLFDEAL 170
           PG+             ++RR  V++L+ P +  S              A+ K K+   ++
Sbjct: 127 PGIVL-----------VVRR--VNYLLMPTLLASGEISVGVSYTSELPANAKRKVLRRSM 173

Query: 171 VCVGCPTNKKLL------GNISFETYMSMGHVAAQFGREMKPSVEQWLLLEHGFNRRIEL 224
                    KLL      G+I+ + + +  H    F  ++   +++  L + G  R + L
Sbjct: 174 --------PKLLRADSVPGSITLDDFCARPHALVSFAGDLSGFIDE-ALEDIGRKRHVVL 224

Query: 225 VVPGFTLIPRLLSGTNRIATLPLRLVKYFEQTIPLRIVTSPLPPLFFTEAIQWPALHNTD 284
            VP F  +  LL+GT+ +AT+P            LR    P+P   F   + W    + D
Sbjct: 225 AVPQFNGLGSLLAGTDIVATVPDYTADALTAAGGLRAEDLPIPVRSFELHMAWRGAQDND 284

Query: 285 PGNIWLR 291
           P   WLR
Sbjct: 285 PAERWLR 291