Pairwise Alignments

Query, 308 a.a., NodD1 nod-box dependent transcriptional activator from Sinorhizobium meliloti 1021

Subject, 308 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

 Score =  115 bits (288), Expect = 1e-30
 Identities = 84/302 (27%), Positives = 140/302 (46%), Gaps = 6/302 (1%)

Query: 1   MRFRGLDLNLLVALDALMTERKLTAAARRINLSQPAMSAAIARLRTYFGDELFSMQGREL 60
           M    +DLNL +  DA+ TE  LT A + + ++QPA+S A++RLR  F D LF    + +
Sbjct: 1   MNLSKVDLNLFIVFDAIYTEANLTRAGQIVGITQPAVSNALSRLRETFNDPLFVRTAQGM 60

Query: 61  IPTPRAEALAPAVRDALLHIQLSVIAWDPLNPAQSDRRFRIILSDFMILVFFARIVERVA 120
           +PTP A+ +   VR+AL  ++ SV      NP Q+++ FRI ++D    V    + +R+ 
Sbjct: 61  VPTPMAQNIIGPVRNALALLRTSVQESRTFNPQQANKTFRISMTDLTEAVILPPLFQRLR 120

Query: 121 REAPGVSFE-LLPLDDDPHELLRRGDVDFLIFPDVFMSSAHPKAKLFDEALVCVGCPTNK 179
           R AP V  E  L    +  + L  G +DF I   +         KL  +  VC     + 
Sbjct: 121 RLAPAVMIESFLCKRRETTKELAAGRLDFAIDAPLNTDPQVRHIKLMQDRYVCALRQGHP 180

Query: 180 KLLGNISFETYMSMGHVAAQFGREMKPSVEQWLLLEHGFNRRIELVVPGFTLIPRLLSGT 239
                ++ ++Y+ M H+     R     V+   L + G  R++ L    + +  ++L  T
Sbjct: 181 LADSKLTLDSYLGMTHIHISSRRNGLGYVD-LALGKMGVQRKVALRSQHYLMASQVLQQT 239

Query: 240 NRIATLPLRLVKYFEQTIPLRIVTSPLPPLFFTEAIQWPALHNTDPGNIWLREILLQEAS 299
           +   T+P R    F +   LR    P+        + W    + DP N W+RE + +   
Sbjct: 240 DMAMTVPER----FARRHQLRYQALPVEVPALETHLYWHESTDQDPANRWMREQITELCE 295

Query: 300 RI 301
           R+
Sbjct: 296 RV 297