Pairwise Alignments

Query, 308 a.a., NodD1 nod-box dependent transcriptional activator from Sinorhizobium meliloti 1021

Subject, 307 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

 Score =  122 bits (305), Expect = 1e-32
 Identities = 94/305 (30%), Positives = 146/305 (47%), Gaps = 19/305 (6%)

Query: 1   MRFRGLDLNLLVALDALMTERKLTAAARRINLSQPAMSAAIARLRTYFGDELFSMQGREL 60
           M     DLNLL   D L+ E+ ++ AA R+ L+QP +S A+ARLR   GD L    GR +
Sbjct: 7   MNISNFDLNLLRVFDMLLREQNVSRAAERLALTQPTVSNALARLRDQLGDPLLVRVGRRM 66

Query: 61  IPTPRAEALAPAVRDALLHIQLSVIAWDPLNPAQSDRRFRIILSDFMILVFFARIVERVA 120
            PTPRA AL   +R AL  I+ ++   D   P +S R+ RI L+DF+  +    ++ R+ 
Sbjct: 67  RPTPRALALEGPIRAALQQIEQTLGTGDGFEPQRSHRQLRIALTDFVEQLCMPPLLARLE 126

Query: 121 REAPGVSFELLPLDDD-PHELLRRGDVDFLI--FPDV-FMSSAHPKAKLFDEALVCVGCP 176
             AP V  +++ L  + P E L RGD+D ++  F +V    + HP  +   E L      
Sbjct: 127 LLAPNVRIDVVHLAPNLPAEALDRGDLDLVLGRFDEVPARFTRHPWRR---ETLQIALRQ 183

Query: 177 TNKKLLGN--ISFETYMSMGHVAAQFGREMKPSVEQWLLLEHGFNRRIELVVPGFTLIPR 234
            +  L     +  + ++ + H+    G + +  V+QW L E G  R+I    P +     
Sbjct: 184 QHPHLAPGQALDLDAFLGLRHIWVH-GGQTRGMVDQW-LAEQGLTRQIAYTTPNYLQAAH 241

Query: 235 LLSGTNRIATLPLRLVKYFEQTIPLRIVTSPLPPLFFTEAIQWPALH----NTDPGNIWL 290
           L + T+    LP +L + F   +PL +   P    F  E  +   +H      DP   WL
Sbjct: 242 LAAATDMCVVLPRQLAQQFAHLLPLAVHELP----FALEPFELEVVHLSHRQHDPALAWL 297

Query: 291 REILL 295
            E +L
Sbjct: 298 VEQIL 302