Pairwise Alignments

Query, 308 a.a., NodD1 nod-box dependent transcriptional activator from Sinorhizobium meliloti 1021

Subject, 320 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

 Score =  162 bits (410), Expect = 1e-44
 Identities = 106/310 (34%), Positives = 159/310 (51%), Gaps = 14/310 (4%)

Query: 1   MRFRGLDLNLLVALDALMTERKLTAAARRINLSQPAMSAAIARLRTYFGDELFSMQGREL 60
           M  R LDLNLL+ LD L  E+ L+AAARR+ +SQP  SA++ RLR YF D+LF   GR +
Sbjct: 1   MDIRRLDLNLLLLLDELYREQNLSAAARRLGMSQPMASASLRRLREYFEDQLFLSTGRGM 60

Query: 61  IPTPRAEALAPAVRDALLHIQLSVIAWDPLNPAQSDRRFRIILSDFMILVFFARIVERVA 120
            PTP   ++A +V   L  I+  ++A     P QSDR F I  SD   L+F   I+ R+ 
Sbjct: 61  RPTPFTVSIAASVSGVLERIKHEILAKPAFQPRQSDRLFTISTSDIGALIFVPPILRRLG 120

Query: 121 REAPGVSFELLPLDDDPH----ELLRRGDVDFLI--FPDVFMSSAHPKAKLFDEALVCVG 174
            +AP      + L   PH    + L +G VD  +  FPD+       +A LF+    C+ 
Sbjct: 121 EDAPNTDLRCVSL---PHQQLEQALEQGSVDLAVGYFPDLQGEQVKTQA-LFEHNFTCIV 176

Query: 175 CPTNKKLLGNISFETYMSMGH-VAAQFGREMKPSVEQWLLLEHGFNRRIELVVPGFTLIP 233
              +  +   +S E +++  H V  Q GR  +  + +  L E    RR+ L VP F  +P
Sbjct: 177 RRNHPSIGDTLSLEQFLAADHLVVNQEGRSQE--IFEQRLRELKLQRRVHLEVPHFMSVP 234

Query: 234 RLLSGTNRIATLPLRLVKYFEQTIPLRIVTSPLPPLFFTEAIQWPALHNTDPGNIWLREI 293
           +L++ TN +AT+PL L  +F     ++++T P+    F   + W      DP   W R  
Sbjct: 235 QLIASTNMVATVPLSLGVWFASE-QIKMLTPPIEVEKFELKLHWHRQMEDDPAVSWFRNA 293

Query: 294 LLQEASRIDP 303
           + +E   +DP
Sbjct: 294 VFEELCNLDP 303