Pairwise Alignments

Query, 308 a.a., NodD1 nod-box dependent transcriptional activator from Sinorhizobium meliloti 1021

Subject, 309 a.a., Transcriptional regulator, LysR family from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  120 bits (300), Expect = 5e-32
 Identities = 91/303 (30%), Positives = 144/303 (47%), Gaps = 25/303 (8%)

Query: 7   DLNLLVALDALMTERKLTAAARRINLSQPAMSAAIARLRTYFGDELFSMQGRELIPTPRA 66
           ++NLLV LDAL+T R +T AA R+ +SQ  MS A++RLR   GD L    G E   T RA
Sbjct: 5   NINLLVCLDALLTTRSVTRAAERLEMSQSGMSNALSRLRELIGDPLLVRSGNEFNLTERA 64

Query: 67  EALAPAVRDALLHIQLSVIAWDPLNPAQSDRRFRIILSDFMILVFFARIVERVAREAPGV 126
           + +A  VR+ +  ++        L+ AQ+     +  +D + L +   +   +A +APG+
Sbjct: 65  QTIAQKVRNGIELMEEIFANEGSLDLAQTQATVTLAAADNLGLNYLPTLSRLIADQAPGL 124

Query: 127 SFEL-LPLDDDPHELLRRGDVDFLI--FPDVFMSSAHP---KAKLFDEALVCV----GCP 176
              +  P  D   E L  G+ D  I  FP+V     HP   +  L+ + + C+     CP
Sbjct: 125 VLNVRAPDPDHVKEWLSEGECDIAIGYFPEV-----HPDLRRLPLYSQPMSCITARGSCP 179

Query: 177 TNKKLLGNISFETYMSMGHVAAQFGREMKPSVEQWL---LLEHGFNRRIELVVPGFTLIP 233
                   +S +TY+   HV        + ++E  L   L   G  R   + VP   LIP
Sbjct: 180 A-------MSLDTYLDRPHVVLGSPFSPRSTLEHTLSHALKAVGHERVRSVRVPSVLLIP 232

Query: 234 RLLSGTNRIATLPLRLVKYFEQTIPLRIVTSPLPPLFFTEAIQWPALHNTDPGNIWLREI 293
            +++G+N +ATLP  + + F   +PL I   P P       + W    +  P  +WLR++
Sbjct: 233 HIVAGSNHVATLPTWICEQFAAHLPLDIWPVPFPLADIETVMVWHERTHRLPLFVWLRDL 292

Query: 294 LLQ 296
           + Q
Sbjct: 293 IRQ 295