Pairwise Alignments

Query, 308 a.a., NodD1 nod-box dependent transcriptional activator from Sinorhizobium meliloti 1021

Subject, 303 a.a., LysR-family transcriptional regulator from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  128 bits (322), Expect = 1e-34
 Identities = 93/295 (31%), Positives = 139/295 (47%), Gaps = 8/295 (2%)

Query: 6   LDLNLLVALDALMTERKLTAAARRINLSQPAMSAAIARLRTYFGDELFSMQGRELIPTPR 65
           +DLNLLV  DA+     +  A   + LSQPA SAA+ARLRT F D LF   G ++ PTPR
Sbjct: 1   VDLNLLVVFDAMARHCSVGRAGEALGLSQPATSAALARLRTVFDDALFVRAGAQMKPTPR 60

Query: 66  AEALAPAVRDALLHIQLSVIAWDPLNPAQSDRRFRIILSDFMILVFFARIVERVAREAPG 125
           A  LAPAV   +  I   ++     +PA+++R F I+  D   + F   ++ R+ +EAP 
Sbjct: 61  AMELAPAVHRVVEAINAEILQKASFDPARAERTFTILTPDIGEVAFLPGVLRRLRQEAPQ 120

Query: 126 VSFELLPLDD-DPHELLRRGDVDFLI--FPDVFMSSAHPKAKLFDEALVCVGCPTNKKLL 182
           V             E L  G+ D  +  FPD+  +    +A LF  +  CV C      +
Sbjct: 121 VRLRATARTRFAAAEALESGEGDLAVGFFPDLHKAGFFQQA-LFKTSYACVTCAHAGPAV 179

Query: 183 GNISFETYMSMGHVAAQ-FGREMKPSVEQWLLLEHGFNRRIELVVPGFTLIPRLLSGTNR 241
             ++   Y++  HV  +  GRE    +    L E G+ R + L +  F  +  LL GT+ 
Sbjct: 180 ERMTQRQYLAARHVVVRPDGRE---HLLDRYLDEKGWQRHVTLELSHFMSLLSLLPGTDL 236

Query: 242 IATLPLRLVKYFEQTIPLRIVTSPLPPLFFTEAIQWPALHNTDPGNIWLREILLQ 296
           +AT+P  +    E+ I +R +  P           W      DP N WLR +  +
Sbjct: 237 VATVPEDIATVMERHIAIRRIALPFAVPVIDVQQFWHRRMQHDPANRWLRGVFYE 291