Pairwise Alignments

Query, 308 a.a., NodD1 nod-box dependent transcriptional activator from Sinorhizobium meliloti 1021

Subject, 325 a.a., LysR family transcriptional regulator from Agrobacterium fabrum C58

 Score =  127 bits (318), Expect = 5e-34
 Identities = 96/297 (32%), Positives = 139/297 (46%), Gaps = 3/297 (1%)

Query: 1   MRFRGLDLNLLVALDALMTERKLTAAARRINLSQPAMSAAIARLRTYFGDELFSMQGREL 60
           M   G+DLNLLVA DAL +ER +T A  RI  +QPAMSAA++RLR    DELF      L
Sbjct: 8   MNLHGIDLNLLVAFDALNSERNVTRAGSRIGRTQPAMSAALSRLRFLLRDELFVRGPNGL 67

Query: 61  IPTPRAEALAPAVRDALLHIQLSVIAWDPLNPAQSDRRFRIILSDFMILVFFARIVERVA 120
            PTPRA  LA  +  AL  IQ ++      +P +S   F I +S     V   R++  + 
Sbjct: 68  QPTPRAVELAEPISLALREIQRTLQFTQGFDPDKSTISFSIAVSAHAGSVILPRLLSLLE 127

Query: 121 REAPGVSFELLPLD--DDPHELLRRGDVDFLIFPDVFMSSAHPKAKLFDEALVCVGCPTN 178
            +APG+  ++      DD   LL  G VD  +      +S    A+LF E  VC+    +
Sbjct: 128 EKAPGIDIKVRDYSSRDDAVSLLDSGGVDLTVGIPPTPTSRILSARLFQERFVCILRKDH 187

Query: 179 KKLLGNISFETYMSMGHVAAQFGREMKPSVEQWLLLEHGFNRRIELVVPGFTLIPRLLSG 238
             L      ET++S+ H+      E    V    L    F RR  + +P   + P L++ 
Sbjct: 188 PILGRPFDPETFLSLTHILVAPDNE-GLDVADAALASKNFRRRAAVTIPHMHVAPALVAS 246

Query: 239 TNRIATLPLRLVKYFEQTIPLRIVTSPLPPLFFTEAIQWPALHNTDPGNIWLREILL 295
           ++ +AT+   +V +      L +   PLP       + W   ++  P   WLR  LL
Sbjct: 247 SDMVATVIESVVAHSGFAERLAVFDFPLPLNPVPFVLSWHRRNDGHPAQQWLRNGLL 303