Pairwise Alignments

Query, 308 a.a., NodD1 nod-box dependent transcriptional activator from Sinorhizobium meliloti 1021

Subject, 330 a.a., HTH-type transcriptional regulator SyrM 1 from Acinetobacter radioresistens SK82

 Score =  117 bits (292), Expect = 5e-31
 Identities = 91/319 (28%), Positives = 146/319 (45%), Gaps = 26/319 (8%)

Query: 1   MRFRGLDLNLLVALDALMTERKLTAAARRINLSQPAMSAAIARLRTYFGDELFSMQGREL 60
           M    +DLNLL+ LD L+ E+ +T AA ++ ++QPAMS  + RLR  F D L       +
Sbjct: 1   MNLERVDLNLLIYLDVLLREKNVTRAAEQLGVTQPAMSNILRRLRNLFNDPLLIRSSEGM 60

Query: 61  IPTPRAEALAPAVRDALLHIQLSVIAWDPLNPAQSDRRFRIILSDFMILVFFARIVERVA 120
            PT RA  L P +RDAL  + + +       P  S+R FRI+ SD+       R+V+ + 
Sbjct: 61  TPTERALELQPRIRDALADLSMILEPRTEFRPYTSNRVFRIMTSDYAEATLVPRLVKALR 120

Query: 121 REAPGVSFELLPLDDDPHELLRRGDVDFLI--FPDVFMSSAHPKAKLFDEALV---CVGC 175
            EAP V  + L   D  +  + +G VD  I  F ++  S        F + LV      C
Sbjct: 121 SEAPNVVLDFLTPSDVSYRDMEQGKVDLAINRFNEIPQS--------FHQVLVWRDSYSC 172

Query: 176 PTNKK--LLGNISFETYMSMGHV-----AAQFGREMKPSVEQWL------LLEHGFNRRI 222
             N K   + N++ ++Y+   H+         G  + P  +  L      L   G  R+I
Sbjct: 173 LLNNKHPAMNNLNLKSYLDAQHIWVSKTGMGVGFGVNPEKQAGLGWIDQALERIGQKRKI 232

Query: 223 ELVVPGFTLIPRLLSGTNRIATLPLRLVKYFEQTIPLRIVTSPLPPLFFTEAIQWPALHN 282
            +    + +   L +  + IATLP R+ +   ++  L I   P     F   + W  L +
Sbjct: 233 SVFTRHYQMPALLAANVDLIATLPTRIARLQAKSQNLIIKDPPFYIPEFELKMAWCPLLH 292

Query: 283 TDPGNIWLREILLQEASRI 301
             P + WLR+++L  A ++
Sbjct: 293 HHPAHRWLRQLILYVARQM 311