Pairwise Alignments

Query, 262 a.a., NodJ ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 259 a.a., membrane protein from Pseudomonas simiae WCS417

 Score = 54.7 bits (130), Expect = 2e-12
 Identities = 35/184 (19%), Positives = 84/184 (45%), Gaps = 11/184 (5%)

Query: 43  LIYLFGLGAGLGMMVGRVDGVSYIAFLSAGMVATSAMTASTFETIYATFARMRAQRTWEA 102
           ++Y    G  +G  +G + G +Y+ ++  G++  S +T S +  + ++F   + QR+ E 
Sbjct: 39  VLYFVIFGNLIGRQIGDMGGFTYMEYIVPGLIMMSVITNS-YGNVVSSFFGSKFQRSIEE 97

Query: 103 ILHTQVTIGDIVLGELAWAATKASLAGTGIGVVAATLGYTEWVSLLYALPVIALTGLAFA 162
           ++ + V+   I++G       +  + G  + +++    + +   L   + V+ LT   F+
Sbjct: 98  LMVSPVSPHTILIGYTLGGVLRGLMVGVIVTLLSLFFTHLQVHHLGVTILVVVLTATIFS 157

Query: 163 SLAMIVTALAPSYEYFIFYQTLVITPMLFLSGAVFPVNQLPGAFQHVTRILPLAHSIDVI 222
            L  I    A +++      T V+TP+ +L           G F  ++ + P   ++ + 
Sbjct: 158 LLGFINAVFARNFDDISIIPTFVLTPLTYLG----------GVFYSISLLPPFWQTVSLA 207

Query: 223 RPIM 226
            P++
Sbjct: 208 NPVL 211