Pairwise Alignments

Query, 262 a.a., NodJ ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 254 a.a., Efflux ABC transporter, permease protein from Variovorax sp. SCN45

 Score = 62.4 bits (150), Expect = 9e-15
 Identities = 55/226 (24%), Positives = 97/226 (42%), Gaps = 7/226 (3%)

Query: 16  WIAVWRRNYLAWKKVALASILGNLADPLIYLFGLGAGLGMMVGRVDGVSYIAFLSAGMVA 75
           W A+  +  L + KV   ++   +   L+YL   G  L   V     V Y AFL  G+V 
Sbjct: 7   WRALLYKETLRFWKVGFQTVGAPVLTALLYLMVFGHVLEGRVTVYGTVGYTAFLVPGLVM 66

Query: 76  TSAMTASTFETIYATFARMRAQRTWEAILHTQVTIGDIVLGELAWAATKASLAGTGIGVV 135
            S +  + F    ++  + +       +L T ++        +  +  +    G G+ +V
Sbjct: 67  MSVLQ-NAFANSSSSIIQSKIMGNLVFVLLTPLSHWGWFFAYVGSSIIRGLAVGLGVFLV 125

Query: 136 AATLGYTEWVSLLYALPVIALTGLAF-ASLAMIVTALAPSYEYFIFYQTLVITPMLFLSG 194
                  ++V+ L+ + V AL G A   +L +I    A  ++    +Q  +I PM FLSG
Sbjct: 126 TMLFAVPDFVAPLWII-VFALLGAAMLGTLGLIAGLWAEKFDQMAVFQNFLIMPMTFLSG 184

Query: 195 AVFPVNQLPGAFQHVTRILPLAHSIDVIRPIMLG----SPLVHVGL 236
             + +  LP  +Q V+ + P  + ID  R    G    SP + +G+
Sbjct: 185 VFYSIGSLPPFWQKVSHLNPFFYMIDGFRYGFFGVSDASPWLSLGI 230