Pairwise Alignments

Query, 262 a.a., NodJ ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 275 a.a., Efflux ABC transporter, permease protein from Variovorax sp. SCN45

 Score =  203 bits (517), Expect = 3e-57
 Identities = 104/254 (40%), Positives = 157/254 (61%), Gaps = 4/254 (1%)

Query: 10  PANGWNWIAVWRRNYLAWKKVALASILGNLADPLIYLFGLGAGLGMMVGRVD----GVSY 65
           P     W  V+ RN L W+K+A+ S++GN+A+PLI+L   G G+G +VG+V      V Y
Sbjct: 19  PEISLRWWPVFLRNLLVWRKLAIPSLIGNIAEPLIWLVAFGYGMGALVGQVSVDDVKVPY 78

Query: 66  IAFLSAGMVATSAMTASTFETIYATFARMRAQRTWEAILHTQVTIGDIVLGELAWAATKA 125
           I FL++G +  SAM A++FE +Y+ F+RM  Q+TW+ I++  V + DIVL E+ WAA K+
Sbjct: 79  ILFLASGSICMSAMNAASFEALYSAFSRMHVQKTWDGIMNAPVGLDDIVLAEMLWAAFKS 138

Query: 126 SLAGTGIGVVAATLGYTEWVSLLYALPVIALTGLAFASLAMIVTALAPSYEYFIFYQTLV 185
               T I  V   LG +    L+ A  V+   G+ F+S+A+I  ALA  Y++F +Y TL 
Sbjct: 139 IFTVTAILFVMLGLGISHSPKLVVAWMVLVGAGITFSSVALIFNALAKGYDFFTYYFTLF 198

Query: 186 ITPMLFLSGAVFPVNQLPGAFQHVTRILPLAHSIDVIRPIMLGSPLVHVGLHIGALCCYA 245
           +TPM+FLSG  FP+ QLP A + V   LPL +++ ++RP+ +        +H   L  YA
Sbjct: 199 MTPMMFLSGVFFPLEQLPAAVRAVAAWLPLTNAVALVRPLFMDQWPTGWWVHAAVLAVYA 258

Query: 246 VVPFFLSTALLRRR 259
           VV F+++ AL R+R
Sbjct: 259 VVAFWIALALTRKR 272