Pairwise Alignments

Query, 326 a.a., SyrM transcriptional regulator from Sinorhizobium meliloti 1021

Subject, 311 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

 Score =  107 bits (266), Expect = 5e-28
 Identities = 88/296 (29%), Positives = 143/296 (48%), Gaps = 15/296 (5%)

Query: 28  NLASIDLNLLVDLEALLQYRHITQAAQHVGRSQPAMSRALSRLRGMLKDDLLVAGSRGLV 87
           ++ S+D+ +L   +AL++ R +++AA  +  SQPA+S +L+RLR    D L    +RG+ 
Sbjct: 5   DIRSLDVGMLRTFDALMRERSVSRAATRLFLSQPAVSASLNRLRDTFGDPLFTRTARGVE 64

Query: 88  LTPLAECLTQMLPSVLDAIRQMMN----LSLAPAQRRWKVTMAMPDHQAVVLLPHLLPRL 143
            T  A  L   +  VL  +  M+        A +QR ++++    D+ + +LLP L   L
Sbjct: 65  PTARAHALAGQVERVLADLSAMLEPGEGFDPAASQRIFRISGG--DYASHLLLPTLANEL 122

Query: 144 HERAPHLDIVTDPLLGGALG-LLEQGEIDVVVGQMGAAPLGYLRRRLYADSFTCVLRHNH 202
                 + I  +      L   L +G+ D+ V      P       LY D +   +R  H
Sbjct: 123 VACGSRVRIYWETSSFLTLTERLRKGDFDIAVLPRLQPPSDCESALLYEDRYVVAVRRGH 182

Query: 203 PALAQEWTIEAFAALRHVAI---ASEPDELFGQIYDRLTKLGLQRGDPMVVSTVLTAAVL 259
           P L +E T++AF    HV +   +S  D+L  Q+   L +LG  R   + +++      L
Sbjct: 183 PTLGREATLDAFCGAPHVFLGYGSSALDDLIDQV---LARLGRTRTMSVAMTSFGQIVDL 239

Query: 260 IAATDSVLVVPSRVATRVAAMLSLAVIPPPVELRPYEVALIWHERCHRDPEHRWLR 315
           +A TD V V+P RVA R   +  LAV P P EL+ Y   + W+ R + D    WL+
Sbjct: 240 LAQTDHVAVMPLRVAERFRDV--LAVHPLPFELQGYRSVVCWNRRSNSDAGVLWLK 293